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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:28.8 nTPM
HPA:28.8 nTPM
GTEx:28.0 nTPM
FANTOM5:34.1 Scaled Tags Per Million
Pig:14.1 nTPM
Mouse:19.1 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043296
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.4
2148 Female, age 91, left hemisphere 28.0
2621 Female, age 67, right hemisphere 28.0
1898 Male, age 80, left hemisphere 25.2
1855 Male, age 76, left hemisphere 25.0
2529 Female, age 94, left hemisphere 24.0
1911 Female, age 85, right hemisphere 22.4
Dentate gyrus
nTPM: 26.6
2010 Male, age 76, both hemispheres 29.3
2530 Female, age 94, left hemisphere 28.1
2531 Female, age 67, both hemispheres 28.1
1927 Female, age 91, both hemispheres 25.2
2246 Female, age 85, both hemispheres 25.2
2528 Male, age 74, both hemispheres 23.5
Entorhinal gyrus
nTPM: 28.8
2613 Female, age 94, left hemisphere 34.8
2764 Male, age 80, right hemisphere 33.0
2686 Male, age 75, right hemisphere 28.5
1787 Male, age 76, left hemisphere 26.5
1938 Female, age 85, left hemisphere 25.2
2117 Female, age 91, right hemisphere 24.6
Hippocampus, CA1
nTPM: 27.5
2045 Male, age 76, both hemispheres 30.6
2749 Male, age 80, left hemisphere 29.4
2082 Female, age 91, right hemisphere 27.3
2527 Male, age 74, both hemispheres 25.6
1873 Female, age 85, both hemispheres 24.6
Hippocampus, CA2
nTPM: 25.8
1963 Male, age 80, left hemisphere 27.9
1940 Female, age 85, left hemisphere 27.3
2113 Female, age 91, right hemisphere 26.8
2249 Male, age 74, both hemispheres 24.5
2437 Female, age 94, left hemisphere 24.3
1892 Male, age 76, both hemispheres 23.7
Hippocampus, CA3
nTPM: 26.0
2861 Female, age 67, both hemispheres 31.8
2620 Female, age 94, left hemisphere 29.3
2137 Male, age 80, left hemisphere 26.0
2436 Male, age 74, both hemispheres 25.7
1867 Male, age 76, both hemispheres 22.0
1891 Female, age 85, both hemispheres 21.1
Parahippocampal cortex
nTPM: 28.1
2018 Male, age 76, both hemispheres 32.4
2622 Female, age 67, right hemisphere 31.7
2532 Female, age 72, left hemisphere 30.2
2693 Female, age 94, both hemispheres 29.2
1933 Female, age 85, both hemispheres 28.5
2245 Female, age 91, both hemispheres 27.9
1850 Male, age 80, both hemispheres 27.8
2250 Female, age 67, right hemisphere 25.1
2692 Male, age 74, both hemispheres 24.5
1990 Female, age 91, right hemisphere 23.8
Perirhinal gyrus
nTPM: 28.5
1794 Male, age 80, right hemisphere 31.6
2521 Female, age 94, right hemisphere 31.3
1841 Female, age 85, right hemisphere 28.2
1847 Female, age 91, left hemisphere 27.4
2848 Male, age 76, right hemisphere 24.2
Subiculum
nTPM: 23.8
1977 Female, age 85, both hemispheres 24.7
2042 Male, age 76, both hemispheres 24.6
2729 Female, age 91, right hemisphere 24.6
2619 Male, age 74, both hemispheres 24.3
1901 Male, age 80, both hemispheres 23.6
2438 Female, age 94, left hemisphere 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.0
Samples: 197

Max nTPM: 52.1
Min nTPM: 14.3
Std nTPM: 7.1
Median nTPM: 27.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 52.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 51.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 49.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 44.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 44.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 43.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 40.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 40.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 39.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 39.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 39.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.1
FF:10169-103B7 60 years, female 38.7
FF:10153-102I9 76 years, female 29.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 15.8
Min nTPM: 10.8
Sample A Female 15.8
Sample B Female 14.1
Sample C Male 13.4
Sample D Male 10.8
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.1
Sample A Female 14.9
Sample B Female 12.1
Sample C Male 13.7
Sample D Male 13.2
Subiculum
nTPM: 12.9
Samples: 4

Max nTPM: 16.0
Min nTPM: 10.9
Sample A Female 16.0
Sample B Female 11.3
Sample C Male 13.3
Sample D Male 10.9
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 18.6
Min nTPM: 10.2
Sample A Female 12.6
Sample B Female 10.2
Sample C Male 18.6
Sample D Male 14.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 22.1
Min nTPM: 17.3
Sample A Male 18.7
Sample B Male 18.1
Sample C Female 17.3
Sample D Female 22.1
Hippocampal formation
nTPM: 17.7
Samples: 4

Max nTPM: 19.4
Min nTPM: 14.8
Sample A Male 14.8
Sample B Male 19.1
Sample C Female 19.4
Sample D Female 17.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
68861988 Antisense, RP_050301_01_C07, Mouse strain C57BL/6J (56 days, male) 5.1

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