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LGALS1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:457.7 nTPM
HPA:457.7 nTPM
GTEx:314.3 nTPM
FANTOM5:124.2 Scaled Tags Per Million
Pig:126.0 nTPM
Mouse:42.7 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000646Antibody CAB002157
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 457.7
Sample id Sample description nTPM
Hippocampus
nTPM: 457.7
2529 Female, age 94, left hemisphere 492.6
1898 Male, age 80, left hemisphere 456.6
1855 Male, age 76, left hemisphere 454.2
2148 Female, age 91, left hemisphere 451.2
2621 Female, age 67, right hemisphere 450.4
1911 Female, age 85, right hemisphere 441.1
Dentate gyrus
nTPM: 452.2
2528 Male, age 74, both hemispheres 474.0
2010 Male, age 76, both hemispheres 471.7
2530 Female, age 94, left hemisphere 461.6
2246 Female, age 85, both hemispheres 442.6
2531 Female, age 67, both hemispheres 437.0
1927 Female, age 91, both hemispheres 426.2
Entorhinal gyrus
nTPM: 455.9
2117 Female, age 91, right hemisphere 479.0
1938 Female, age 85, left hemisphere 464.8
2764 Male, age 80, right hemisphere 457.3
2686 Male, age 75, right hemisphere 454.7
1787 Male, age 76, left hemisphere 454.2
2613 Female, age 94, left hemisphere 425.2
Hippocampus, CA1
nTPM: 443.0
2527 Male, age 74, both hemispheres 476.2
2082 Female, age 91, right hemisphere 443.2
2045 Male, age 76, both hemispheres 441.3
1873 Female, age 85, both hemispheres 430.6
2749 Male, age 80, left hemisphere 423.4
Hippocampus, CA2
nTPM: 451.3
2249 Male, age 74, both hemispheres 489.8
2437 Female, age 94, left hemisphere 459.6
1940 Female, age 85, left hemisphere 450.9
2113 Female, age 91, right hemisphere 448.5
1963 Male, age 80, left hemisphere 433.9
1892 Male, age 76, both hemispheres 425.3
Hippocampus, CA3
nTPM: 446.7
2436 Male, age 74, both hemispheres 473.9
1867 Male, age 76, both hemispheres 450.4
2620 Female, age 94, left hemisphere 445.8
1891 Female, age 85, both hemispheres 439.5
2861 Female, age 67, both hemispheres 436.6
2137 Male, age 80, left hemisphere 434.0
Parahippocampal cortex
nTPM: 454.0
1933 Female, age 85, both hemispheres 472.2
2018 Male, age 76, both hemispheres 466.4
2532 Female, age 72, left hemisphere 465.7
1990 Female, age 91, right hemisphere 457.3
2245 Female, age 91, both hemispheres 457.3
1850 Male, age 80, both hemispheres 451.8
2250 Female, age 67, right hemisphere 447.8
2692 Male, age 74, both hemispheres 445.5
2622 Female, age 67, right hemisphere 444.1
2693 Female, age 94, both hemispheres 432.0
Perirhinal gyrus
nTPM: 452.5
1847 Female, age 91, left hemisphere 464.9
1794 Male, age 80, right hemisphere 463.1
2521 Female, age 94, right hemisphere 453.0
1841 Female, age 85, right hemisphere 451.7
2848 Male, age 76, right hemisphere 429.7
Subiculum
nTPM: 453.4
2042 Male, age 76, both hemispheres 464.6
2619 Male, age 74, both hemispheres 462.1
2729 Female, age 91, right hemisphere 460.0
2438 Female, age 94, left hemisphere 450.2
1977 Female, age 85, both hemispheres 446.9
1901 Male, age 80, both hemispheres 436.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 314.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 314.3
Samples: 197

Max nTPM: 825.9
Min nTPM: 130.4
Std nTPM: 115.0
Median nTPM: 296.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 825.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 741.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 692.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 689.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 680.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 667.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 610.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 586.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 575.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 560.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 556.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 124.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 124.2
FF:10153-102I9 76 years, female 134.4
FF:10169-103B7 60 years, female 114.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 126.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 76.8
Samples: 4

Max nTPM: 92.9
Min nTPM: 52.8
Sample A Female 92.9
Sample B Female 89.9
Sample C Male 71.4
Sample D Male 52.8
Entorhinal cortex
nTPM: 72.7
Samples: 4

Max nTPM: 83.2
Min nTPM: 58.0
Sample A Female 78.4
Sample B Female 83.2
Sample C Male 71.0
Sample D Male 58.0
Subiculum
nTPM: 101.2
Samples: 4

Max nTPM: 131.7
Min nTPM: 81.4
Sample A Female 81.4
Sample B Female 87.6
Sample C Male 104.1
Sample D Male 131.7
Ventral hippocampus
nTPM: 126.0
Samples: 4

Max nTPM: 166.3
Min nTPM: 65.2
Sample A Female 141.9
Sample B Female 130.5
Sample C Male 166.3
Sample D Male 65.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.3
Samples: 4

Max nTPM: 41.3
Min nTPM: 35.1
Sample A Male 35.1
Sample B Male 35.4
Sample C Female 41.3
Sample D Female 41.2
Hippocampal formation
nTPM: 42.8
Samples: 4

Max nTPM: 46.8
Min nTPM: 35.7
Sample A Male 35.7
Sample B Male 42.8
Sample C Female 45.7
Sample D Female 46.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
75651181 Antisense, RP_060518_01_C07, Mouse strain C57BL/6J (56 days, male) 0.8
70634417 Antisense, RP_050725_01_F12, Mouse strain C57BL/6J (56 days, male) 0.7
79749622 Antisense, RP_071204_02_D11, Mouse strain C57BL/6J (56 days, male) 0.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.