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PIK3IP1
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:42.5 nTPM
HPA:42.5 nTPM
GTEx:36.9 nTPM
FANTOM5:74.0 Scaled Tags Per Million
Pig:21.6 nTPM
Mouse:25.1 nTPM
Allen mouse:2.3 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 42.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 33.1
2481 Female, age 94, left hemisphere 39.9
2288 Male, age 75, left hemisphere 34.6
1781 Male, age 74, unknown 33.3
2290 Female, age 72, unknown 33.2
2289 Male, age 61, right hemisphere 32.5
2846 Female, age 79, unknown 31.7
1854 Male, age 80, left hemisphere 30.1
1857 Female, age 85, left hemisphere 29.5
Claustrum
nTPM: 33.3
2292 Female, age 85, both hemispheres 40.6
1956 Male, age 74, unknown 35.7
2196 Female, age 79, unknown 34.3
2198 Male, age 80, both hemispheres 34.2
2568 Male, age 61, both hemispheres 31.9
2392 Female, age 94, both hemispheres 31.4
2284 Female, age 91, both hemispheres 31.3
2491 Male, age 75, both hemispheres 30.7
2645 Female, age 72, unknown 29.6
Globus pallidus, externus
nTPM: 42.5
2646 Male, age 61, right hemisphere 46.5
1996 Male, age 80, right hemisphere 45.2
2772 Female, age 79, unknown 42.8
2567 Female, age 72, unknown 41.8
2395 Male, age 75, both hemispheres 36.2
Globus pallidus, internus
nTPM: 42.5
2778 Female, age 91, both hemispheres 47.6
2483 Female, age 94, right hemisphere 45.4
2111 Female, age 85, right hemisphere 44.3
2566 Female, age 72, unknown 42.8
2037 Male, age 80, right hemisphere 40.0
1818 Male, age 74, unknown 38.9
2287 Male, age 75, right hemisphere 38.4
Nucleus accumbens
nTPM: 34.5
2824 Male, age 61, right hemisphere 40.2
2391 Female, age 94, left hemisphere 37.6
2732 Male, age 80, right hemisphere 35.0
1783 Male, age 74, unknown 34.5
2698 Female, age 72, unknown 34.1
2286 Male, age 75, left hemisphere 34.0
1856 Female, age 91, right hemisphere 30.3
1806 Female, age 85, left hemisphere 30.2
Nucleus basalis of Meynert
nTPM: 35.7
2569 Male, age 61, both hemispheres 46.3
2484 Female, age 94, left hemisphere 33.1
2393 Male, age 80, right hemisphere 32.4
2821 Male, age 75, both hemispheres 31.1
Nucleus of the diagonal band
nTPM: 29.5
2029 Male, age 61, right hemisphere 31.1
1979 Male, age 74, unknown 30.4
1812 Female, age 91, both hemispheres 30.0
2195 Female, age 85, both hemispheres 28.1
2775 Male, age 80, right hemisphere 27.7
Olfactory tubercle
nTPM: 30.3
2487 Female, age 94, left hemisphere 31.3
1998 Female, age 91, both hemispheres 30.6
2856 Male, age 75, right hemisphere 30.2
1846 Male, age 80, right hemisphere 29.0
Putamen
nTPM: 33.7
2482 Female, age 94, left hemisphere 44.0
1937 Female, age 91, right hemisphere 35.4
2489 Female, age 72, unknown 35.3
2466 Female, age 79, unknown 33.4
2647 Male, age 75, left hemisphere 30.5
1829 Male, age 74, unknown 30.3
1838 Male, age 80, right hemisphere 26.8
Septal nuclei
nTPM: 31.0
2059 Female, age 85, both hemispheres 34.1
2199 Male, age 80, right hemisphere 33.0
2394 Male, age 61, left hemisphere 32.4
2031 Female, age 72, unknown 30.6
1960 Male, age 74, unknown 29.9
2009 Female, age 91, both hemispheres 29.1
2629 Female, age 94, right hemisphere 27.7

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 36.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 35.9
Samples: 246

Max nTPM: 91.0
Min nTPM: 13.6
Std nTPM: 13.8
Median nTPM: 33.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 91.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 89.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 87.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 86.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 85.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 82.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 74.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 69.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 64.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 64.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 63.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 32.4
Samples: 246

Max nTPM: 83.2
Min nTPM: 14.3
Std nTPM: 11.6
Median nTPM: 29.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 83.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 73.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 71.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 66.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 65.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 64.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 61.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 60.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 60.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 58.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 58.3
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Brain - Putamen (basal ganglia)
Average nTPM: 36.9
Samples: 205

Max nTPM: 161.0
Min nTPM: 11.4
Std nTPM: 16.6
Median nTPM: 33.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 161.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 111.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 88.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 83.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 80.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 68.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 68.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 67.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 65.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 64.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 63.9
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 74.0
FF:10164-103B2 76 years, female 74.0
Globus pallidus
Scaled Tags Per Million: 46.2
FF:10161-103A8 76 years, female 55.4
FF:10175-103C4 60 years, female 37.1
Nucleus accumbens
Scaled Tags Per Million: 42.8
FF:10037-101F1 23-56 years, mixed 42.8
Putamen
Scaled Tags Per Million: 35.8
FF:10176-103C5 60 years, female 35.8

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 21.6
Pig sample Sample description nTPM
Caudate
nTPM: 17.8
Samples: 4

Max nTPM: 20.5
Min nTPM: 15.8
Sample A Female 15.8
Sample B Female 18.3
Sample C Male 20.5
Sample D Male 16.4
Putamen
nTPM: 21.6
Samples: 4

Max nTPM: 24.5
Min nTPM: 17.8
Sample A Female 24.5
Sample B Female 17.8
Sample C Male 23.1
Sample D Male 20.8
Septum
nTPM: 19.3
Samples: 4

Max nTPM: 22.3
Min nTPM: 15.3
Sample A Female 22.3
Sample B Female 19.8
Sample C Male 19.8
Sample D Male 15.3
Ventral pallidum
nTPM: 21.4
Samples: 4

Max nTPM: 25.1
Min nTPM: 18.2
Sample A Female 18.2
Sample B Female 21.5
Sample C Male 25.1
Sample D Male 20.6

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 25.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 23.9
Samples: 4

Max nTPM: 26.0
Min nTPM: 20.6
Sample A Male 26.0
Sample B Male 23.3
Sample C Female 25.6
Sample D Female 20.6
Septum
nTPM: 25.1
Samples: 4

Max nTPM: 28.6
Min nTPM: 20.1
Sample A Male 27.0
Sample B Male 20.1
Sample C Female 24.8
Sample D Female 28.6
Ventral forebrain
nTPM: 23.1
Samples: 4

Max nTPM: 24.6
Min nTPM: 21.3
Sample A Male 24.6
Sample B Male 22.9
Sample C Female 23.6
Sample D Female 21.3

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.9
69014728 Antisense, RP_050310_01_F02, Mouse strain C57BL/6J (56 days, male) 1.9
Pallidum
Expression energy: 2.3
69014728 Antisense, RP_050310_01_F02, Mouse strain C57BL/6J (56 days, male) 2.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.