ABOUTMENU
HELP
NEWS
GCAT
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:26.1 nTPM
HPA:26.1 nTPM
GTEx:22.2 nTPM
FANTOM5:12.4 Scaled Tags Per Million
Pig:7.1 nTPM
Mouse:12.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063924
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.1
Sample id Sample description nTPM
Hippocampus
nTPM: 24.7
1898 Male, age 80, left hemisphere 26.9
2529 Female, age 94, left hemisphere 25.1
2621 Female, age 67, right hemisphere 24.5
1911 Female, age 85, right hemisphere 24.3
2148 Female, age 91, left hemisphere 23.8
1855 Male, age 76, left hemisphere 23.3
Dentate gyrus
nTPM: 26.1
2530 Female, age 94, left hemisphere 28.4
2528 Male, age 74, both hemispheres 28.3
1927 Female, age 91, both hemispheres 26.7
2246 Female, age 85, both hemispheres 25.3
2531 Female, age 67, both hemispheres 24.6
2010 Male, age 76, both hemispheres 23.1
Entorhinal gyrus
nTPM: 24.5
2613 Female, age 94, left hemisphere 25.9
2764 Male, age 80, right hemisphere 25.8
1938 Female, age 85, left hemisphere 24.9
1787 Male, age 76, left hemisphere 24.8
2117 Female, age 91, right hemisphere 22.8
2686 Male, age 75, right hemisphere 22.7
Hippocampus, CA1
nTPM: 25.4
2527 Male, age 74, both hemispheres 28.8
2749 Male, age 80, left hemisphere 27.9
1873 Female, age 85, both hemispheres 25.9
2082 Female, age 91, right hemisphere 23.0
2045 Male, age 76, both hemispheres 21.4
Hippocampus, CA2
nTPM: 25.3
1963 Male, age 80, left hemisphere 28.3
2249 Male, age 74, both hemispheres 26.5
2437 Female, age 94, left hemisphere 25.3
1892 Male, age 76, both hemispheres 25.1
2113 Female, age 91, right hemisphere 23.4
1940 Female, age 85, left hemisphere 23.3
Hippocampus, CA3
nTPM: 25.1
2436 Male, age 74, both hemispheres 26.8
2620 Female, age 94, left hemisphere 26.7
2137 Male, age 80, left hemisphere 24.9
2861 Female, age 67, both hemispheres 24.7
1891 Female, age 85, both hemispheres 24.2
1867 Male, age 76, both hemispheres 23.4
Parahippocampal cortex
nTPM: 24.3
2692 Male, age 74, both hemispheres 26.0
1990 Female, age 91, right hemisphere 25.4
2250 Female, age 67, right hemisphere 25.3
1850 Male, age 80, both hemispheres 24.8
1933 Female, age 85, both hemispheres 24.8
2245 Female, age 91, both hemispheres 24.5
2622 Female, age 67, right hemisphere 24.2
2693 Female, age 94, both hemispheres 23.5
2018 Male, age 76, both hemispheres 22.6
2532 Female, age 72, left hemisphere 22.1
Perirhinal gyrus
nTPM: 24.4
1847 Female, age 91, left hemisphere 26.5
1794 Male, age 80, right hemisphere 25.6
1841 Female, age 85, right hemisphere 24.5
2521 Female, age 94, right hemisphere 23.2
2848 Male, age 76, right hemisphere 22.3
Subiculum
nTPM: 24.0
2619 Male, age 74, both hemispheres 26.9
1977 Female, age 85, both hemispheres 24.5
1901 Male, age 80, both hemispheres 24.4
2729 Female, age 91, right hemisphere 23.4
2438 Female, age 94, left hemisphere 23.3
2042 Male, age 76, both hemispheres 21.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.2
Samples: 197

Max nTPM: 47.9
Min nTPM: 6.1
Std nTPM: 6.8
Median nTPM: 22.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 38.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 37.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 37.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 34.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 33.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 33.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 32.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 32.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 32.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.4
FF:10169-103B7 60 years, female 13.6
FF:10153-102I9 76 years, female 11.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.2
Samples: 4

Max nTPM: 7.3
Min nTPM: 4.9
Sample A Female 6.1
Sample B Female 7.3
Sample C Male 6.3
Sample D Male 4.9
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.3
Sample A Female 5.3
Sample B Female 7.7
Sample C Male 6.5
Sample D Male 6.1
Subiculum
nTPM: 6.5
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.7
Sample A Female 6.0
Sample B Female 6.7
Sample C Male 7.7
Sample D Male 5.7
Ventral hippocampus
nTPM: 7.1
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.4
Sample A Female 6.9
Sample B Female 6.4
Sample C Male 8.7
Sample D Male 6.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.8
Samples: 4

Max nTPM: 14.2
Min nTPM: 11.5
Sample A Male 11.5
Sample B Male 14.2
Sample C Female 13.6
Sample D Female 11.7
Hippocampal formation
nTPM: 11.7
Samples: 4

Max nTPM: 12.6
Min nTPM: 10.7
Sample A Male 11.8
Sample B Male 10.7
Sample C Female 11.5
Sample D Female 12.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68499135 Antisense, RP_050118_01_A05, Mouse strain C57BL/6J (56 days, male) 0.3
Hippocampal formation
Expression energy: 0.3
68499135 Antisense, RP_050118_01_A05, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.