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CBY1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.8 nTPM
HPA:38.8 nTPM
GTEx:28.9 nTPM
FANTOM5:16.5 Scaled Tags Per Million
Mouse:64.6 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.8
Sample id Sample description nTPM
Hippocampus
nTPM: 38.4
1855 Male, age 76, left hemisphere 41.8
2148 Female, age 91, left hemisphere 40.2
1911 Female, age 85, right hemisphere 37.9
2529 Female, age 94, left hemisphere 37.6
2621 Female, age 67, right hemisphere 37.2
1898 Male, age 80, left hemisphere 35.9
Dentate gyrus
nTPM: 38.4
2531 Female, age 67, both hemispheres 39.9
2246 Female, age 85, both hemispheres 39.2
1927 Female, age 91, both hemispheres 38.9
2528 Male, age 74, both hemispheres 38.9
2530 Female, age 94, left hemisphere 36.9
2010 Male, age 76, both hemispheres 36.5
Entorhinal gyrus
nTPM: 37.7
2686 Male, age 75, right hemisphere 38.6
1787 Male, age 76, left hemisphere 38.3
2764 Male, age 80, right hemisphere 38.1
2613 Female, age 94, left hemisphere 38.0
2117 Female, age 91, right hemisphere 36.8
1938 Female, age 85, left hemisphere 36.5
Hippocampus, CA1
nTPM: 38.8
2045 Male, age 76, both hemispheres 40.4
2082 Female, age 91, right hemisphere 39.5
1873 Female, age 85, both hemispheres 38.5
2527 Male, age 74, both hemispheres 37.9
2749 Male, age 80, left hemisphere 37.5
Hippocampus, CA2
nTPM: 37.2
1940 Female, age 85, left hemisphere 38.4
2113 Female, age 91, right hemisphere 38.4
2437 Female, age 94, left hemisphere 37.1
2249 Male, age 74, both hemispheres 36.9
1892 Male, age 76, both hemispheres 36.4
1963 Male, age 80, left hemisphere 36.0
Hippocampus, CA3
nTPM: 38.7
2620 Female, age 94, left hemisphere 40.8
2861 Female, age 67, both hemispheres 40.7
2137 Male, age 80, left hemisphere 39.3
1891 Female, age 85, both hemispheres 39.1
1867 Male, age 76, both hemispheres 36.3
2436 Male, age 74, both hemispheres 35.9
Parahippocampal cortex
nTPM: 37.8
2692 Male, age 74, both hemispheres 39.9
2693 Female, age 94, both hemispheres 39.3
2532 Female, age 72, left hemisphere 39.1
2245 Female, age 91, both hemispheres 38.4
1850 Male, age 80, both hemispheres 38.2
1990 Female, age 91, right hemisphere 37.6
2622 Female, age 67, right hemisphere 37.4
2250 Female, age 67, right hemisphere 36.2
1933 Female, age 85, both hemispheres 36.1
2018 Male, age 76, both hemispheres 35.8
Perirhinal gyrus
nTPM: 37.7
2848 Male, age 76, right hemisphere 39.6
1841 Female, age 85, right hemisphere 38.0
1794 Male, age 80, right hemisphere 37.6
2521 Female, age 94, right hemisphere 37.3
1847 Female, age 91, left hemisphere 36.0
Subiculum
nTPM: 37.2
2729 Female, age 91, right hemisphere 39.2
1901 Male, age 80, both hemispheres 38.5
2619 Male, age 74, both hemispheres 38.1
1977 Female, age 85, both hemispheres 37.2
2438 Female, age 94, left hemisphere 35.2
2042 Male, age 76, both hemispheres 34.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.9
Samples: 197

Max nTPM: 49.5
Min nTPM: 15.5
Std nTPM: 6.5
Median nTPM: 29.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 49.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 47.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 45.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 44.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 44.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 42.8
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 41.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 41.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 41.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 40.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 39.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.5
FF:10153-102I9 76 years, female 20.5
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.1
Samples: 4

Max nTPM: 69.3
Min nTPM: 55.6
Sample A Male 60.0
Sample B Male 63.4
Sample C Female 69.3
Sample D Female 55.6
Hippocampal formation
nTPM: 64.6
Samples: 4

Max nTPM: 76.1
Min nTPM: 58.0
Sample A Male 76.1
Sample B Male 58.0
Sample C Female 60.8
Sample D Female 63.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
69059941 Antisense, RP_050317_04_F01, Mouse strain C57BL/6J (56 days, male) 7.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.