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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:27.7 nTPM
HPA:27.7 nTPM
GTEx:19.7 nTPM
FANTOM5:44.0 Scaled Tags Per Million
Pig:48.4 nTPM
Mouse:124.1 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003037
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
1898 Male, age 80, left hemisphere 28.3
2529 Female, age 94, left hemisphere 27.3
2621 Female, age 67, right hemisphere 27.2
1855 Male, age 76, left hemisphere 26.5
2148 Female, age 91, left hemisphere 25.7
1911 Female, age 85, right hemisphere 25.3
Dentate gyrus
nTPM: 26.7
2010 Male, age 76, both hemispheres 28.4
2530 Female, age 94, left hemisphere 27.7
1927 Female, age 91, both hemispheres 26.8
2528 Male, age 74, both hemispheres 26.1
2246 Female, age 85, both hemispheres 25.9
2531 Female, age 67, both hemispheres 25.4
Entorhinal gyrus
nTPM: 26.8
2764 Male, age 80, right hemisphere 28.1
1787 Male, age 76, left hemisphere 27.2
1938 Female, age 85, left hemisphere 27.0
2117 Female, age 91, right hemisphere 26.3
2613 Female, age 94, left hemisphere 26.3
2686 Male, age 75, right hemisphere 25.8
Hippocampus, CA1
nTPM: 27.7
2749 Male, age 80, left hemisphere 33.0
1873 Female, age 85, both hemispheres 26.9
2045 Male, age 76, both hemispheres 26.9
2527 Male, age 74, both hemispheres 26.1
2082 Female, age 91, right hemisphere 25.5
Hippocampus, CA2
nTPM: 27.5
1963 Male, age 80, left hemisphere 30.6
1892 Male, age 76, both hemispheres 30.2
2249 Male, age 74, both hemispheres 26.8
2437 Female, age 94, left hemisphere 26.1
2113 Female, age 91, right hemisphere 25.8
1940 Female, age 85, left hemisphere 25.7
Hippocampus, CA3
nTPM: 27.3
2137 Male, age 80, left hemisphere 30.0
1867 Male, age 76, both hemispheres 27.8
2620 Female, age 94, left hemisphere 26.8
2436 Male, age 74, both hemispheres 26.7
1891 Female, age 85, both hemispheres 26.4
2861 Female, age 67, both hemispheres 26.2
Parahippocampal cortex
nTPM: 26.5
1850 Male, age 80, both hemispheres 27.8
1990 Female, age 91, right hemisphere 27.2
2250 Female, age 67, right hemisphere 26.9
2532 Female, age 72, left hemisphere 26.9
2018 Male, age 76, both hemispheres 26.7
2245 Female, age 91, both hemispheres 26.7
1933 Female, age 85, both hemispheres 26.3
2692 Male, age 74, both hemispheres 26.1
2693 Female, age 94, both hemispheres 25.3
2622 Female, age 67, right hemisphere 25.0
Perirhinal gyrus
nTPM: 27.7
1794 Male, age 80, right hemisphere 28.7
1847 Female, age 91, left hemisphere 28.5
1841 Female, age 85, right hemisphere 27.5
2521 Female, age 94, right hemisphere 26.9
2848 Male, age 76, right hemisphere 26.8
Subiculum
nTPM: 26.9
1977 Female, age 85, both hemispheres 27.9
1901 Male, age 80, both hemispheres 27.8
2438 Female, age 94, left hemisphere 27.1
2042 Male, age 76, both hemispheres 27.0
2619 Male, age 74, both hemispheres 26.1
2729 Female, age 91, right hemisphere 25.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.7
Samples: 197

Max nTPM: 42.6
Min nTPM: 10.6
Std nTPM: 4.9
Median nTPM: 18.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 37.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 34.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 33.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 32.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 30.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 29.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 28.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 27.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 27.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.0
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 41.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.4
Samples: 4

Max nTPM: 65.6
Min nTPM: 34.1
Sample A Female 65.6
Sample B Female 46.2
Sample C Male 47.7
Sample D Male 34.1
Entorhinal cortex
nTPM: 40.2
Samples: 4

Max nTPM: 45.3
Min nTPM: 31.4
Sample A Female 44.5
Sample B Female 45.3
Sample C Male 39.5
Sample D Male 31.4
Subiculum
nTPM: 41.3
Samples: 4

Max nTPM: 53.8
Min nTPM: 35.5
Sample A Female 53.8
Sample B Female 38.5
Sample C Male 37.5
Sample D Male 35.5
Ventral hippocampus
nTPM: 44.9
Samples: 4

Max nTPM: 52.3
Min nTPM: 33.3
Sample A Female 52.3
Sample B Female 33.3
Sample C Male 51.1
Sample D Male 43.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 124.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.2
Samples: 4

Max nTPM: 127.2
Min nTPM: 105.2
Sample A Male 105.2
Sample B Male 121.2
Sample C Female 127.2
Sample D Female 115.1
Hippocampal formation
nTPM: 124.1
Samples: 4

Max nTPM: 137.8
Min nTPM: 118.7
Sample A Male 137.8
Sample B Male 118.7
Sample C Female 120.9
Sample D Female 119.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69262238 Antisense, RP_050301_01_G07, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

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