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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:84.7 nTPM
HPA:84.7 nTPM
GTEx:83.8 nTPM
FANTOM5:167.6 Scaled Tags Per Million
Pig:144.8 nTPM
Mouse:276.1 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029673Antibody CAB034277
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.7
Sample id Sample description nTPM
Hippocampus
nTPM: 70.2
1898 Male, age 80, left hemisphere 97.7
2621 Female, age 67, right hemisphere 92.1
1855 Male, age 76, left hemisphere 75.4
2148 Female, age 91, left hemisphere 72.1
2529 Female, age 94, left hemisphere 45.0
1911 Female, age 85, right hemisphere 38.9
Dentate gyrus
nTPM: 73.7
2530 Female, age 94, left hemisphere 103.0
1927 Female, age 91, both hemispheres 99.0
2010 Male, age 76, both hemispheres 70.8
2531 Female, age 67, both hemispheres 66.6
2528 Male, age 74, both hemispheres 53.8
2246 Female, age 85, both hemispheres 48.9
Entorhinal gyrus
nTPM: 78.7
2613 Female, age 94, left hemisphere 124.3
2764 Male, age 80, right hemisphere 100.9
2686 Male, age 75, right hemisphere 77.5
1787 Male, age 76, left hemisphere 74.6
1938 Female, age 85, left hemisphere 69.2
2117 Female, age 91, right hemisphere 25.7
Hippocampus, CA1
nTPM: 77.1
2749 Male, age 80, left hemisphere 169.1
1873 Female, age 85, both hemispheres 81.6
2527 Male, age 74, both hemispheres 59.2
2082 Female, age 91, right hemisphere 38.1
2045 Male, age 76, both hemispheres 37.3
Hippocampus, CA2
nTPM: 72.6
1963 Male, age 80, left hemisphere 115.6
1892 Male, age 76, both hemispheres 114.2
2437 Female, age 94, left hemisphere 85.5
2113 Female, age 91, right hemisphere 45.1
2249 Male, age 74, both hemispheres 42.6
1940 Female, age 85, left hemisphere 32.5
Hippocampus, CA3
nTPM: 82.4
2861 Female, age 67, both hemispheres 129.9
2137 Male, age 80, left hemisphere 129.1
2620 Female, age 94, left hemisphere 82.6
1867 Male, age 76, both hemispheres 72.2
2436 Male, age 74, both hemispheres 43.5
1891 Female, age 85, both hemispheres 37.2
Parahippocampal cortex
nTPM: 73.6
2693 Female, age 94, both hemispheres 95.5
2622 Female, age 67, right hemisphere 87.5
2245 Female, age 91, both hemispheres 86.3
2250 Female, age 67, right hemisphere 73.2
1850 Male, age 80, both hemispheres 72.4
1933 Female, age 85, both hemispheres 72.1
1990 Female, age 91, right hemisphere 71.6
2532 Female, age 72, left hemisphere 71.0
2692 Male, age 74, both hemispheres 59.5
2018 Male, age 76, both hemispheres 47.0
Perirhinal gyrus
nTPM: 84.7
1847 Female, age 91, left hemisphere 106.6
2521 Female, age 94, right hemisphere 94.8
1794 Male, age 80, right hemisphere 84.5
2848 Male, age 76, right hemisphere 69.3
1841 Female, age 85, right hemisphere 68.4
Subiculum
nTPM: 53.1
1901 Male, age 80, both hemispheres 68.4
1977 Female, age 85, both hemispheres 64.6
2438 Female, age 94, left hemisphere 62.3
2619 Male, age 74, both hemispheres 59.9
2729 Female, age 91, right hemisphere 36.0
2042 Male, age 76, both hemispheres 27.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 83.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.8
Samples: 197

Max nTPM: 264.2
Min nTPM: 14.1
Std nTPM: 47.7
Median nTPM: 71.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 264.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 234.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 218.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 205.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 181.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 180.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 177.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 173.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 169.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 167.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 167.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 167.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 167.6
FF:10169-103B7 60 years, female 257.4
FF:10153-102I9 76 years, female 77.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 144.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 142.4
Samples: 4

Max nTPM: 183.8
Min nTPM: 95.9
Sample A Female 183.8
Sample B Female 157.4
Sample C Male 132.6
Sample D Male 95.9
Entorhinal cortex
nTPM: 138.0
Samples: 4

Max nTPM: 166.5
Min nTPM: 117.3
Sample A Female 147.2
Sample B Female 120.9
Sample C Male 166.5
Sample D Male 117.3
Subiculum
nTPM: 144.9
Samples: 4

Max nTPM: 193.3
Min nTPM: 124.5
Sample A Female 193.3
Sample B Female 124.5
Sample C Male 134.8
Sample D Male 126.8
Ventral hippocampus
nTPM: 136.0
Samples: 4

Max nTPM: 177.5
Min nTPM: 93.0
Sample A Female 133.4
Sample B Female 93.0
Sample C Male 177.5
Sample D Male 140.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 276.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 276.2
Samples: 4

Max nTPM: 337.6
Min nTPM: 240.5
Sample A Male 253.3
Sample B Male 273.2
Sample C Female 240.5
Sample D Female 337.6
Hippocampal formation
nTPM: 211.1
Samples: 4

Max nTPM: 236.6
Min nTPM: 197.1
Sample A Male 197.1
Sample B Male 210.6
Sample C Female 236.6
Sample D Female 200.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
70303719 Antisense, RP_050609_02_B10, Mouse strain C57BL/6J (56 days, male) 11.6

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The Human Protein Atlas

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