ABOUTMENU
HELP
NEWS
EIF3D
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:46.2 nTPM
HPA:46.2 nTPM
GTEx:39.9 nTPM
FANTOM5:65.6 Scaled Tags Per Million
Pig:45.2 nTPM
Mouse:85.4 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063330Antibody HPA066216
Glial cells LowNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.2
Sample id Sample description nTPM
Hippocampus
nTPM: 46.1
1855 Male, age 76, left hemisphere 47.6
2529 Female, age 94, left hemisphere 46.6
1898 Male, age 80, left hemisphere 46.4
2621 Female, age 67, right hemisphere 45.8
2148 Female, age 91, left hemisphere 45.4
1911 Female, age 85, right hemisphere 44.6
Dentate gyrus
nTPM: 45.8
2010 Male, age 76, both hemispheres 47.2
2530 Female, age 94, left hemisphere 46.4
2531 Female, age 67, both hemispheres 46.2
2246 Female, age 85, both hemispheres 46.1
1927 Female, age 91, both hemispheres 44.7
2528 Male, age 74, both hemispheres 44.0
Entorhinal gyrus
nTPM: 44.9
2117 Female, age 91, right hemisphere 45.8
1938 Female, age 85, left hemisphere 45.3
2764 Male, age 80, right hemisphere 45.2
2686 Male, age 75, right hemisphere 44.8
1787 Male, age 76, left hemisphere 44.4
2613 Female, age 94, left hemisphere 44.1
Hippocampus, CA1
nTPM: 45.6
2045 Male, age 76, both hemispheres 48.3
2082 Female, age 91, right hemisphere 45.0
2527 Male, age 74, both hemispheres 45.0
2749 Male, age 80, left hemisphere 45.0
1873 Female, age 85, both hemispheres 44.6
Hippocampus, CA2
nTPM: 45.2
1892 Male, age 76, both hemispheres 46.6
1940 Female, age 85, left hemisphere 46.3
1963 Male, age 80, left hemisphere 45.8
2437 Female, age 94, left hemisphere 44.9
2113 Female, age 91, right hemisphere 44.3
2249 Male, age 74, both hemispheres 43.1
Hippocampus, CA3
nTPM: 45.6
2436 Male, age 74, both hemispheres 46.6
2137 Male, age 80, left hemisphere 46.5
1867 Male, age 76, both hemispheres 46.3
2620 Female, age 94, left hemisphere 44.8
2861 Female, age 67, both hemispheres 44.6
1891 Female, age 85, both hemispheres 44.5
Parahippocampal cortex
nTPM: 45.1
1850 Male, age 80, both hemispheres 48.2
2532 Female, age 72, left hemisphere 46.9
2018 Male, age 76, both hemispheres 46.5
2692 Male, age 74, both hemispheres 45.6
2245 Female, age 91, both hemispheres 44.7
1933 Female, age 85, both hemispheres 44.6
1990 Female, age 91, right hemisphere 44.4
2250 Female, age 67, right hemisphere 44.1
2622 Female, age 67, right hemisphere 44.1
2693 Female, age 94, both hemispheres 42.1
Perirhinal gyrus
nTPM: 46.2
1794 Male, age 80, right hemisphere 48.0
1841 Female, age 85, right hemisphere 46.3
1847 Female, age 91, left hemisphere 45.8
2521 Female, age 94, right hemisphere 45.8
2848 Male, age 76, right hemisphere 45.3
Subiculum
nTPM: 45.2
2438 Female, age 94, left hemisphere 48.5
1977 Female, age 85, both hemispheres 46.0
2042 Male, age 76, both hemispheres 44.9
2619 Male, age 74, both hemispheres 44.8
1901 Male, age 80, both hemispheres 43.8
2729 Female, age 91, right hemisphere 43.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.9
Samples: 197

Max nTPM: 74.0
Min nTPM: 25.9
Std nTPM: 6.2
Median nTPM: 39.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 74.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 60.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 53.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 53.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 52.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 52.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 52.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 51.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 51.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 51.3
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 49.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.6
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 59.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.2
Samples: 4

Max nTPM: 58.8
Min nTPM: 35.0
Sample A Female 58.8
Sample B Female 41.4
Sample C Male 45.5
Sample D Male 35.0
Entorhinal cortex
nTPM: 37.8
Samples: 4

Max nTPM: 41.2
Min nTPM: 33.5
Sample A Female 41.2
Sample B Female 40.5
Sample C Male 35.9
Sample D Male 33.5
Subiculum
nTPM: 40.0
Samples: 4

Max nTPM: 54.5
Min nTPM: 34.3
Sample A Female 54.5
Sample B Female 36.6
Sample C Male 34.5
Sample D Male 34.3
Ventral hippocampus
nTPM: 41.8
Samples: 4

Max nTPM: 50.0
Min nTPM: 29.8
Sample A Female 44.4
Sample B Female 29.8
Sample C Male 50.0
Sample D Male 42.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.8
Samples: 4

Max nTPM: 87.4
Min nTPM: 81.5
Sample A Male 84.5
Sample B Male 81.5
Sample C Female 81.9
Sample D Female 87.4
Hippocampal formation
nTPM: 85.4
Samples: 4

Max nTPM: 90.1
Min nTPM: 81.7
Sample A Male 90.1
Sample B Male 81.7
Sample C Female 84.6
Sample D Female 85.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
69671959 Antisense, RP_050428_02_F11, Mouse strain C57BL/6J (56 days, male) 8.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.