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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:184.1 nTPM
HPA:184.1 nTPM
GTEx:189.4 nTPM
FANTOM5:153.3 Scaled Tags Per Million
Pig:28.6 nTPM
Mouse:35.5 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038091
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 184.1
Sample id Sample description nTPM
Hippocampus
nTPM: 183.7
2148 Female, age 91, left hemisphere 195.7
1855 Male, age 76, left hemisphere 189.9
1911 Female, age 85, right hemisphere 186.1
2621 Female, age 67, right hemisphere 185.5
1898 Male, age 80, left hemisphere 178.5
2529 Female, age 94, left hemisphere 166.7
Dentate gyrus
nTPM: 184.1
2531 Female, age 67, both hemispheres 190.9
2010 Male, age 76, both hemispheres 185.9
1927 Female, age 91, both hemispheres 184.2
2246 Female, age 85, both hemispheres 182.7
2528 Male, age 74, both hemispheres 181.6
2530 Female, age 94, left hemisphere 179.2
Entorhinal gyrus
nTPM: 183.5
2686 Male, age 75, right hemisphere 189.3
2613 Female, age 94, left hemisphere 189.1
2764 Male, age 80, right hemisphere 187.4
2117 Female, age 91, right hemisphere 181.7
1787 Male, age 76, left hemisphere 178.5
1938 Female, age 85, left hemisphere 175.1
Hippocampus, CA1
nTPM: 183.4
1873 Female, age 85, both hemispheres 195.8
2045 Male, age 76, both hemispheres 190.2
2082 Female, age 91, right hemisphere 181.8
2527 Male, age 74, both hemispheres 177.5
2749 Male, age 80, left hemisphere 171.6
Hippocampus, CA2
nTPM: 179.4
1963 Male, age 80, left hemisphere 186.0
1940 Female, age 85, left hemisphere 185.4
1892 Male, age 76, both hemispheres 184.1
2113 Female, age 91, right hemisphere 178.8
2249 Male, age 74, both hemispheres 175.2
2437 Female, age 94, left hemisphere 166.8
Hippocampus, CA3
nTPM: 183.2
2620 Female, age 94, left hemisphere 212.1
2861 Female, age 67, both hemispheres 195.8
1891 Female, age 85, both hemispheres 188.1
1867 Male, age 76, both hemispheres 182.1
2137 Male, age 80, left hemisphere 163.3
2436 Male, age 74, both hemispheres 157.9
Parahippocampal cortex
nTPM: 175.6
2692 Male, age 74, both hemispheres 190.4
2622 Female, age 67, right hemisphere 185.4
2693 Female, age 94, both hemispheres 179.3
2018 Male, age 76, both hemispheres 177.0
2532 Female, age 72, left hemisphere 175.3
1990 Female, age 91, right hemisphere 173.9
1933 Female, age 85, both hemispheres 173.5
1850 Male, age 80, both hemispheres 171.1
2245 Female, age 91, both hemispheres 167.6
2250 Female, age 67, right hemisphere 162.5
Perirhinal gyrus
nTPM: 166.6
2521 Female, age 94, right hemisphere 172.8
2848 Male, age 76, right hemisphere 169.2
1847 Female, age 91, left hemisphere 168.8
1794 Male, age 80, right hemisphere 161.3
1841 Female, age 85, right hemisphere 161.2
Subiculum
nTPM: 181.0
2042 Male, age 76, both hemispheres 193.5
2729 Female, age 91, right hemisphere 190.9
1901 Male, age 80, both hemispheres 182.3
1977 Female, age 85, both hemispheres 180.2
2619 Male, age 74, both hemispheres 175.9
2438 Female, age 94, left hemisphere 163.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 189.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 189.4
Samples: 197

Max nTPM: 433.9
Min nTPM: 44.7
Std nTPM: 60.3
Median nTPM: 186.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 433.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 371.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 340.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 339.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 334.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 331.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 316.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 314.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 302.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 290.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 289.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 153.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.3
FF:10153-102I9 76 years, female 194.7
FF:10169-103B7 60 years, female 111.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 31.3
Min nTPM: 20.9
Sample A Female 31.3
Sample B Female 28.5
Sample C Male 27.2
Sample D Male 20.9
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 32.1
Min nTPM: 25.8
Sample A Female 25.8
Sample B Female 27.7
Sample C Male 28.9
Sample D Male 32.1
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 27.9
Min nTPM: 21.3
Sample A Female 27.9
Sample B Female 21.7
Sample C Male 23.0
Sample D Male 21.3
Ventral hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 36.5
Min nTPM: 19.1
Sample A Female 22.3
Sample B Female 19.1
Sample C Male 28.3
Sample D Male 36.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 31.6
Min nTPM: 24.3
Sample A Male 31.6
Sample B Male 29.5
Sample C Female 29.5
Sample D Female 24.3
Hippocampal formation
nTPM: 35.6
Samples: 4

Max nTPM: 43.7
Min nTPM: 30.0
Sample A Male 30.0
Sample B Male 34.7
Sample C Female 43.7
Sample D Female 33.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
76003377 Antisense, RP_060608_02_D04, Mouse strain C57BL/6J (56 days, male) 3.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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