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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:123.8 nTPM
HPA:123.8 nTPM
GTEx:104.8 nTPM
FANTOM5:120.2 Scaled Tags Per Million
Pig:97.2 nTPM
Mouse:111.9 nTPM
Allen mouse:22.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043233Antibody HPA046412Antibody HPA047114Antibody HPA047116
Glial cells MediumMediumLowLow
Neuronal cells MediumLowNot detectedMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 123.8
Sample id Sample description nTPM
Hippocampus
nTPM: 123.0
2529 Female, age 94, left hemisphere 131.3
1898 Male, age 80, left hemisphere 127.8
1855 Male, age 76, left hemisphere 124.7
1911 Female, age 85, right hemisphere 118.8
2621 Female, age 67, right hemisphere 118.3
2148 Female, age 91, left hemisphere 116.7
Dentate gyrus
nTPM: 117.4
2010 Male, age 76, both hemispheres 131.2
2530 Female, age 94, left hemisphere 126.4
2246 Female, age 85, both hemispheres 118.9
2528 Male, age 74, both hemispheres 111.6
1927 Female, age 91, both hemispheres 110.8
2531 Female, age 67, both hemispheres 105.5
Entorhinal gyrus
nTPM: 117.4
2117 Female, age 91, right hemisphere 132.2
1787 Male, age 76, left hemisphere 118.8
1938 Female, age 85, left hemisphere 118.7
2686 Male, age 75, right hemisphere 115.9
2764 Male, age 80, right hemisphere 115.9
2613 Female, age 94, left hemisphere 103.0
Hippocampus, CA1
nTPM: 122.9
1873 Female, age 85, both hemispheres 131.5
2527 Male, age 74, both hemispheres 127.1
2045 Male, age 76, both hemispheres 123.0
2749 Male, age 80, left hemisphere 118.9
2082 Female, age 91, right hemisphere 114.1
Hippocampus, CA2
nTPM: 119.2
2249 Male, age 74, both hemispheres 125.5
1892 Male, age 76, both hemispheres 124.7
1963 Male, age 80, left hemisphere 118.4
1940 Female, age 85, left hemisphere 117.6
2437 Female, age 94, left hemisphere 115.9
2113 Female, age 91, right hemisphere 113.0
Hippocampus, CA3
nTPM: 114.5
1891 Female, age 85, both hemispheres 124.8
1867 Male, age 76, both hemispheres 122.1
2436 Male, age 74, both hemispheres 119.0
2137 Male, age 80, left hemisphere 118.8
2620 Female, age 94, left hemisphere 105.2
2861 Female, age 67, both hemispheres 97.1
Parahippocampal cortex
nTPM: 117.7
2018 Male, age 76, both hemispheres 130.0
1850 Male, age 80, both hemispheres 122.2
2250 Female, age 67, right hemisphere 120.4
2532 Female, age 72, left hemisphere 119.6
2692 Male, age 74, both hemispheres 119.3
1990 Female, age 91, right hemisphere 118.4
1933 Female, age 85, both hemispheres 118.3
2245 Female, age 91, both hemispheres 117.7
2693 Female, age 94, both hemispheres 106.2
2622 Female, age 67, right hemisphere 105.0
Perirhinal gyrus
nTPM: 115.6
2848 Male, age 76, right hemisphere 120.3
1841 Female, age 85, right hemisphere 117.8
1847 Female, age 91, left hemisphere 116.0
1794 Male, age 80, right hemisphere 113.6
2521 Female, age 94, right hemisphere 110.5
Subiculum
nTPM: 123.8
2042 Male, age 76, both hemispheres 131.0
2438 Female, age 94, left hemisphere 130.0
1901 Male, age 80, both hemispheres 126.6
2619 Male, age 74, both hemispheres 121.1
1977 Female, age 85, both hemispheres 119.9
2729 Female, age 91, right hemisphere 114.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 104.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 104.8
Samples: 197

Max nTPM: 262.8
Min nTPM: 54.9
Std nTPM: 30.4
Median nTPM: 100.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 262.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 188.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 188.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 188.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 186.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 185.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 181.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 177.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 175.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 171.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 163.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.2
FF:10153-102I9 76 years, female 155.7
FF:10169-103B7 60 years, female 84.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 97.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 97.2
Samples: 4

Max nTPM: 127.4
Min nTPM: 74.4
Sample A Female 127.4
Sample B Female 83.0
Sample C Male 103.9
Sample D Male 74.4
Entorhinal cortex
nTPM: 77.4
Samples: 4

Max nTPM: 90.2
Min nTPM: 67.8
Sample A Female 73.9
Sample B Female 90.2
Sample C Male 77.5
Sample D Male 67.8
Subiculum
nTPM: 87.8
Samples: 4

Max nTPM: 109.1
Min nTPM: 76.1
Sample A Female 109.1
Sample B Female 84.7
Sample C Male 76.1
Sample D Male 81.2
Ventral hippocampus
nTPM: 85.4
Samples: 4

Max nTPM: 90.7
Min nTPM: 72.4
Sample A Female 89.4
Sample B Female 72.4
Sample C Male 90.7
Sample D Male 88.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 111.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.9
Samples: 4

Max nTPM: 114.6
Min nTPM: 104.9
Sample A Male 104.9
Sample B Male 114.6
Sample C Female 113.1
Sample D Female 111.0
Hippocampal formation
nTPM: 111.9
Samples: 4

Max nTPM: 122.6
Min nTPM: 103.6
Sample A Male 122.6
Sample B Male 103.6
Sample C Female 108.5
Sample D Female 113.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.6
532638 Antisense, RP_040810_02_H01, Mouse strain C57BL/6J (56 days, male) 22.6

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The Human Protein Atlas

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