ABOUTMENU
HELP
NEWS
PMM1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:49.5 nTPM
HPA:49.5 nTPM
GTEx:42.0 nTPM
FANTOM5:25.3 Scaled Tags Per Million
Pig:18.9 nTPM
Mouse:216.5 nTPM
Allen mouse:11.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030712
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.5
Sample id Sample description nTPM
Hippocampus
nTPM: 47.0
1898 Male, age 80, left hemisphere 51.8
2529 Female, age 94, left hemisphere 50.2
2148 Female, age 91, left hemisphere 45.8
1855 Male, age 76, left hemisphere 44.9
1911 Female, age 85, right hemisphere 44.6
2621 Female, age 67, right hemisphere 44.6
Dentate gyrus
nTPM: 45.7
1927 Female, age 91, both hemispheres 47.8
2528 Male, age 74, both hemispheres 46.7
2010 Male, age 76, both hemispheres 46.4
2246 Female, age 85, both hemispheres 45.6
2530 Female, age 94, left hemisphere 44.7
2531 Female, age 67, both hemispheres 43.0
Entorhinal gyrus
nTPM: 47.8
2764 Male, age 80, right hemisphere 52.1
1938 Female, age 85, left hemisphere 49.3
1787 Male, age 76, left hemisphere 49.0
2117 Female, age 91, right hemisphere 47.9
2686 Male, age 75, right hemisphere 44.7
2613 Female, age 94, left hemisphere 44.0
Hippocampus, CA1
nTPM: 48.2
2749 Male, age 80, left hemisphere 54.2
2527 Male, age 74, both hemispheres 47.8
2082 Female, age 91, right hemisphere 47.7
1873 Female, age 85, both hemispheres 47.1
2045 Male, age 76, both hemispheres 44.3
Hippocampus, CA2
nTPM: 47.4
1963 Male, age 80, left hemisphere 50.8
1892 Male, age 76, both hemispheres 48.6
2249 Male, age 74, both hemispheres 48.5
2113 Female, age 91, right hemisphere 46.7
1940 Female, age 85, left hemisphere 45.1
2437 Female, age 94, left hemisphere 44.9
Hippocampus, CA3
nTPM: 46.7
2137 Male, age 80, left hemisphere 50.2
1867 Male, age 76, both hemispheres 47.7
2620 Female, age 94, left hemisphere 46.9
2436 Male, age 74, both hemispheres 46.3
1891 Female, age 85, both hemispheres 45.0
2861 Female, age 67, both hemispheres 43.9
Parahippocampal cortex
nTPM: 46.4
1850 Male, age 80, both hemispheres 50.1
1990 Female, age 91, right hemisphere 48.6
1933 Female, age 85, both hemispheres 47.9
2250 Female, age 67, right hemisphere 47.1
2245 Female, age 91, both hemispheres 46.8
2692 Male, age 74, both hemispheres 45.8
2532 Female, age 72, left hemisphere 45.1
2018 Male, age 76, both hemispheres 44.9
2622 Female, age 67, right hemisphere 44.4
2693 Female, age 94, both hemispheres 43.3
Perirhinal gyrus
nTPM: 49.5
1847 Female, age 91, left hemisphere 54.8
1794 Male, age 80, right hemisphere 50.9
1841 Female, age 85, right hemisphere 48.1
2521 Female, age 94, right hemisphere 47.4
2848 Male, age 76, right hemisphere 46.3
Subiculum
nTPM: 45.8
2619 Male, age 74, both hemispheres 49.3
1977 Female, age 85, both hemispheres 48.9
1901 Male, age 80, both hemispheres 46.8
2729 Female, age 91, right hemisphere 46.5
2042 Male, age 76, both hemispheres 42.7
2438 Female, age 94, left hemisphere 40.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.0
Samples: 197

Max nTPM: 91.0
Min nTPM: 15.2
Std nTPM: 12.4
Median nTPM: 40.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 91.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 76.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 75.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 71.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 68.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 67.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 66.0
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 64.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 64.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 64.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 64.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.3
FF:10153-102I9 76 years, female 29.7
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 25.6
Min nTPM: 12.9
Sample A Female 25.6
Sample B Female 16.2
Sample C Male 21.0
Sample D Male 12.9
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 15.4
Min nTPM: 11.9
Sample A Female 11.9
Sample B Female 13.2
Sample C Male 15.4
Sample D Male 12.6
Subiculum
nTPM: 15.2
Samples: 4

Max nTPM: 18.8
Min nTPM: 13.3
Sample A Female 18.8
Sample B Female 14.8
Sample C Male 13.3
Sample D Male 13.7
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.4
Min nTPM: 11.2
Sample A Female 15.9
Sample B Female 11.2
Sample C Male 18.4
Sample D Male 17.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 216.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 209.7
Samples: 4

Max nTPM: 227.1
Min nTPM: 191.8
Sample A Male 191.8
Sample B Male 207.5
Sample C Female 212.3
Sample D Female 227.1
Hippocampal formation
nTPM: 216.5
Samples: 4

Max nTPM: 228.7
Min nTPM: 210.0
Sample A Male 210.5
Sample B Male 210.0
Sample C Female 228.7
Sample D Female 216.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.3
71735835 Antisense, RP_051010_03_C09, Mouse strain C57BL/6J (56 days, male) 11.4
67936010 Antisense, RP_041102_01_A04, Mouse strain C57BL/6J (56 days, male) 11.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.