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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:24.0 nTPM
HPA:24.0 nTPM
GTEx:28.0 nTPM
FANTOM5:33.4 Scaled Tags Per Million
Mouse:61.4 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002932
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.6
1898 Male, age 80, left hemisphere 22.8
1855 Male, age 76, left hemisphere 22.3
2148 Female, age 91, left hemisphere 21.6
2621 Female, age 67, right hemisphere 21.3
1911 Female, age 85, right hemisphere 21.1
2529 Female, age 94, left hemisphere 20.6
Dentate gyrus
nTPM: 22.4
1927 Female, age 91, both hemispheres 24.1
2528 Male, age 74, both hemispheres 23.1
2010 Male, age 76, both hemispheres 22.5
2246 Female, age 85, both hemispheres 22.1
2530 Female, age 94, left hemisphere 21.3
2531 Female, age 67, both hemispheres 21.0
Entorhinal gyrus
nTPM: 21.7
1787 Male, age 76, left hemisphere 23.2
1938 Female, age 85, left hemisphere 23.2
2117 Female, age 91, right hemisphere 21.7
2764 Male, age 80, right hemisphere 21.6
2686 Male, age 75, right hemisphere 20.5
2613 Female, age 94, left hemisphere 20.2
Hippocampus, CA1
nTPM: 21.8
1873 Female, age 85, both hemispheres 23.7
2045 Male, age 76, both hemispheres 22.0
2082 Female, age 91, right hemisphere 21.6
2527 Male, age 74, both hemispheres 21.6
2749 Male, age 80, left hemisphere 20.2
Hippocampus, CA2
nTPM: 22.1
1940 Female, age 85, left hemisphere 23.9
1892 Male, age 76, both hemispheres 23.0
2249 Male, age 74, both hemispheres 21.8
2113 Female, age 91, right hemisphere 21.7
2437 Female, age 94, left hemisphere 21.3
1963 Male, age 80, left hemisphere 20.9
Hippocampus, CA3
nTPM: 22.2
1867 Male, age 76, both hemispheres 24.5
2436 Male, age 74, both hemispheres 23.0
1891 Female, age 85, both hemispheres 22.9
2620 Female, age 94, left hemisphere 22.1
2137 Male, age 80, left hemisphere 21.5
2861 Female, age 67, both hemispheres 19.5
Parahippocampal cortex
nTPM: 22.3
2018 Male, age 76, both hemispheres 24.4
1850 Male, age 80, both hemispheres 24.2
2693 Female, age 94, both hemispheres 23.5
1990 Female, age 91, right hemisphere 22.2
2250 Female, age 67, right hemisphere 22.2
2245 Female, age 91, both hemispheres 21.8
1933 Female, age 85, both hemispheres 21.3
2622 Female, age 67, right hemisphere 21.3
2532 Female, age 72, left hemisphere 21.0
2692 Male, age 74, both hemispheres 20.9
Perirhinal gyrus
nTPM: 24.0
1794 Male, age 80, right hemisphere 25.9
1841 Female, age 85, right hemisphere 23.9
2521 Female, age 94, right hemisphere 23.8
2848 Male, age 76, right hemisphere 23.3
1847 Female, age 91, left hemisphere 23.1
Subiculum
nTPM: 22.7
2438 Female, age 94, left hemisphere 23.9
2729 Female, age 91, right hemisphere 23.4
1901 Male, age 80, both hemispheres 23.1
1977 Female, age 85, both hemispheres 23.0
2042 Male, age 76, both hemispheres 21.7
2619 Male, age 74, both hemispheres 21.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.0
Samples: 197

Max nTPM: 85.4
Min nTPM: 14.4
Std nTPM: 6.9
Median nTPM: 27.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 85.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 46.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 44.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 41.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 40.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 40.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 39.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 38.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 38.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 38.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 37.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.4
FF:10169-103B7 60 years, female 37.6
FF:10153-102I9 76 years, female 29.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.5
Samples: 4

Max nTPM: 59.4
Min nTPM: 38.8
Sample A Male 43.5
Sample B Male 59.4
Sample C Female 52.2
Sample D Female 38.8
Hippocampal formation
nTPM: 61.4
Samples: 4

Max nTPM: 75.1
Min nTPM: 53.4
Sample A Male 75.1
Sample B Male 56.3
Sample C Female 53.4
Sample D Female 60.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
70543008 Antisense, RP_050329_01_F10, Mouse strain C57BL/6J (56 days, male) 9.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.