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SRSF5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:75.9 nTPM
HPA:75.9 nTPM
GTEx:114.2 nTPM
FANTOM5:745.6 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:98.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043484
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.9
Sample id Sample description nTPM
Hippocampus
nTPM: 69.7
2529 Female, age 94, left hemisphere 72.9
1898 Male, age 80, left hemisphere 72.0
2148 Female, age 91, left hemisphere 71.8
1911 Female, age 85, right hemisphere 70.9
2621 Female, age 67, right hemisphere 66.9
1855 Male, age 76, left hemisphere 63.5
Dentate gyrus
nTPM: 62.6
2531 Female, age 67, both hemispheres 69.1
1927 Female, age 91, both hemispheres 66.1
2246 Female, age 85, both hemispheres 62.5
2530 Female, age 94, left hemisphere 62.5
2010 Male, age 76, both hemispheres 62.0
2528 Male, age 74, both hemispheres 53.6
Entorhinal gyrus
nTPM: 72.4
2613 Female, age 94, left hemisphere 88.0
2686 Male, age 75, right hemisphere 78.3
2764 Male, age 80, right hemisphere 72.8
1938 Female, age 85, left hemisphere 66.2
2117 Female, age 91, right hemisphere 65.9
1787 Male, age 76, left hemisphere 63.1
Hippocampus, CA1
nTPM: 67.5
2749 Male, age 80, left hemisphere 91.9
2527 Male, age 74, both hemispheres 67.4
1873 Female, age 85, both hemispheres 66.5
2082 Female, age 91, right hemisphere 56.0
2045 Male, age 76, both hemispheres 55.9
Hippocampus, CA2
nTPM: 63.9
1892 Male, age 76, both hemispheres 69.6
1940 Female, age 85, left hemisphere 67.5
2249 Male, age 74, both hemispheres 65.8
1963 Male, age 80, left hemisphere 64.2
2437 Female, age 94, left hemisphere 59.1
2113 Female, age 91, right hemisphere 57.3
Hippocampus, CA3
nTPM: 75.9
2137 Male, age 80, left hemisphere 93.7
2620 Female, age 94, left hemisphere 78.7
1867 Male, age 76, both hemispheres 76.5
2436 Male, age 74, both hemispheres 73.1
1891 Female, age 85, both hemispheres 67.5
2861 Female, age 67, both hemispheres 65.9
Parahippocampal cortex
nTPM: 67.0
2693 Female, age 94, both hemispheres 79.4
2245 Female, age 91, both hemispheres 73.7
2692 Male, age 74, both hemispheres 71.2
1850 Male, age 80, both hemispheres 69.3
2622 Female, age 67, right hemisphere 68.4
2532 Female, age 72, left hemisphere 66.1
1933 Female, age 85, both hemispheres 65.6
2018 Male, age 76, both hemispheres 64.2
1990 Female, age 91, right hemisphere 56.7
2250 Female, age 67, right hemisphere 55.8
Perirhinal gyrus
nTPM: 60.5
1794 Male, age 80, right hemisphere 66.0
2521 Female, age 94, right hemisphere 63.9
1841 Female, age 85, right hemisphere 62.3
1847 Female, age 91, left hemisphere 58.8
2848 Male, age 76, right hemisphere 51.4
Subiculum
nTPM: 65.8
1901 Male, age 80, both hemispheres 81.9
1977 Female, age 85, both hemispheres 69.6
2042 Male, age 76, both hemispheres 66.3
2619 Male, age 74, both hemispheres 65.6
2438 Female, age 94, left hemisphere 64.8
2729 Female, age 91, right hemisphere 46.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 114.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.2
Samples: 197

Max nTPM: 257.1
Min nTPM: 23.7
Std nTPM: 35.9
Median nTPM: 113.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 257.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 241.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 234.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 233.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 203.7
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 199.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 185.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 184.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 178.0
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 177.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 176.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 745.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 745.6
FF:10169-103B7 60 years, female 854.8
FF:10153-102I9 76 years, female 636.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 23.7
Min nTPM: 21.0
Sample A Female 21.0
Sample B Female 21.3
Sample C Male 23.7
Sample D Male 21.2
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 22.9
Min nTPM: 19.3
Sample A Female 19.9
Sample B Female 22.9
Sample C Male 19.3
Sample D Male 21.2
Subiculum
nTPM: 23.1
Samples: 4

Max nTPM: 23.9
Min nTPM: 22.7
Sample A Female 22.7
Sample B Female 23.9
Sample C Male 22.7
Sample D Male 23.0
Ventral hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 22.9
Min nTPM: 19.2
Sample A Female 22.1
Sample B Female 21.2
Sample C Male 19.2
Sample D Male 22.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.9
Samples: 4

Max nTPM: 101.2
Min nTPM: 71.6
Sample A Male 101.2
Sample B Male 98.6
Sample C Female 92.3
Sample D Female 71.6
Hippocampal formation
nTPM: 98.5
Samples: 4

Max nTPM: 118.0
Min nTPM: 80.2
Sample A Male 118.0
Sample B Male 103.5
Sample C Female 80.2
Sample D Female 92.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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