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RAB5IF
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:32.8 nTPM
HPA:32.8 nTPM
GTEx:35.9 nTPM
FANTOM5:49.8 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057387
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.8
Sample id Sample description nTPM
Hippocampus
nTPM: 32.3
1898 Male, age 80, left hemisphere 36.7
1855 Male, age 76, left hemisphere 32.5
2148 Female, age 91, left hemisphere 31.6
2529 Female, age 94, left hemisphere 31.2
1911 Female, age 85, right hemisphere 31.0
2621 Female, age 67, right hemisphere 30.5
Dentate gyrus
nTPM: 31.6
2530 Female, age 94, left hemisphere 34.9
2010 Male, age 76, both hemispheres 32.8
1927 Female, age 91, both hemispheres 32.4
2528 Male, age 74, both hemispheres 30.8
2246 Female, age 85, both hemispheres 30.1
2531 Female, age 67, both hemispheres 28.5
Entorhinal gyrus
nTPM: 31.3
2117 Female, age 91, right hemisphere 33.7
1938 Female, age 85, left hemisphere 33.6
2764 Male, age 80, right hemisphere 31.8
1787 Male, age 76, left hemisphere 31.1
2613 Female, age 94, left hemisphere 29.0
2686 Male, age 75, right hemisphere 28.3
Hippocampus, CA1
nTPM: 32.8
2749 Male, age 80, left hemisphere 41.1
1873 Female, age 85, both hemispheres 33.2
2527 Male, age 74, both hemispheres 32.6
2045 Male, age 76, both hemispheres 30.4
2082 Female, age 91, right hemisphere 26.7
Hippocampus, CA2
nTPM: 32.1
1892 Male, age 76, both hemispheres 35.3
1963 Male, age 80, left hemisphere 33.3
2249 Male, age 74, both hemispheres 32.1
2437 Female, age 94, left hemisphere 31.7
1940 Female, age 85, left hemisphere 31.5
2113 Female, age 91, right hemisphere 28.5
Hippocampus, CA3
nTPM: 32.8
1867 Male, age 76, both hemispheres 35.2
2137 Male, age 80, left hemisphere 34.0
2436 Male, age 74, both hemispheres 33.8
2620 Female, age 94, left hemisphere 32.3
1891 Female, age 85, both hemispheres 31.4
2861 Female, age 67, both hemispheres 29.8
Parahippocampal cortex
nTPM: 30.9
1850 Male, age 80, both hemispheres 32.9
1933 Female, age 85, both hemispheres 32.4
1990 Female, age 91, right hemisphere 32.4
2245 Female, age 91, both hemispheres 32.1
2018 Male, age 76, both hemispheres 31.8
2532 Female, age 72, left hemisphere 31.4
2250 Female, age 67, right hemisphere 31.2
2692 Male, age 74, both hemispheres 29.1
2693 Female, age 94, both hemispheres 29.1
2622 Female, age 67, right hemisphere 26.4
Perirhinal gyrus
nTPM: 31.5
1847 Female, age 91, left hemisphere 33.5
1841 Female, age 85, right hemisphere 32.5
1794 Male, age 80, right hemisphere 31.4
2848 Male, age 76, right hemisphere 30.4
2521 Female, age 94, right hemisphere 29.9
Subiculum
nTPM: 31.3
1901 Male, age 80, both hemispheres 34.2
1977 Female, age 85, both hemispheres 33.1
2042 Male, age 76, both hemispheres 32.9
2619 Male, age 74, both hemispheres 31.5
2438 Female, age 94, left hemisphere 28.3
2729 Female, age 91, right hemisphere 27.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.9
Samples: 197

Max nTPM: 73.2
Min nTPM: 16.6
Std nTPM: 10.4
Median nTPM: 34.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 73.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 72.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 67.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 66.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 61.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 60.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 58.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 58.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 57.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 55.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 53.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.8
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 41.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.