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RAE1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.3 nTPM
HPA:18.3 nTPM
GTEx:13.0 nTPM
FANTOM5:34.5 Scaled Tags Per Million
Pig:13.7 nTPM
Mouse:53.8 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.3
Sample id Sample description nTPM
Hippocampus
nTPM: 16.6
1898 Male, age 80, left hemisphere 18.8
1855 Male, age 76, left hemisphere 17.2
1911 Female, age 85, right hemisphere 17.2
2621 Female, age 67, right hemisphere 15.9
2148 Female, age 91, left hemisphere 15.3
2529 Female, age 94, left hemisphere 15.1
Dentate gyrus
nTPM: 17.6
2010 Male, age 76, both hemispheres 19.7
1927 Female, age 91, both hemispheres 19.0
2531 Female, age 67, both hemispheres 17.7
2246 Female, age 85, both hemispheres 17.5
2528 Male, age 74, both hemispheres 16.7
2530 Female, age 94, left hemisphere 15.2
Entorhinal gyrus
nTPM: 16.4
2764 Male, age 80, right hemisphere 19.6
1787 Male, age 76, left hemisphere 17.3
1938 Female, age 85, left hemisphere 17.1
2117 Female, age 91, right hemisphere 15.0
2613 Female, age 94, left hemisphere 15.0
2686 Male, age 75, right hemisphere 14.7
Hippocampus, CA1
nTPM: 18.3
2749 Male, age 80, left hemisphere 20.2
2045 Male, age 76, both hemispheres 20.1
1873 Female, age 85, both hemispheres 17.6
2082 Female, age 91, right hemisphere 17.4
2527 Male, age 74, both hemispheres 16.1
Hippocampus, CA2
nTPM: 16.7
1963 Male, age 80, left hemisphere 17.8
2249 Male, age 74, both hemispheres 17.8
1892 Male, age 76, both hemispheres 17.7
1940 Female, age 85, left hemisphere 16.3
2113 Female, age 91, right hemisphere 15.5
2437 Female, age 94, left hemisphere 14.9
Hippocampus, CA3
nTPM: 17.4
2620 Female, age 94, left hemisphere 19.6
2137 Male, age 80, left hemisphere 18.5
1867 Male, age 76, both hemispheres 18.0
2436 Male, age 74, both hemispheres 16.5
1891 Female, age 85, both hemispheres 16.0
2861 Female, age 67, both hemispheres 15.7
Parahippocampal cortex
nTPM: 16.9
1850 Male, age 80, both hemispheres 20.0
2018 Male, age 76, both hemispheres 18.3
1990 Female, age 91, right hemisphere 18.2
1933 Female, age 85, both hemispheres 17.9
2245 Female, age 91, both hemispheres 16.5
2693 Female, age 94, both hemispheres 16.3
2250 Female, age 67, right hemisphere 16.0
2532 Female, age 72, left hemisphere 16.0
2622 Female, age 67, right hemisphere 15.2
2692 Male, age 74, both hemispheres 14.2
Perirhinal gyrus
nTPM: 18.2
1794 Male, age 80, right hemisphere 19.8
1847 Female, age 91, left hemisphere 19.3
2848 Male, age 76, right hemisphere 17.9
1841 Female, age 85, right hemisphere 17.6
2521 Female, age 94, right hemisphere 16.2
Subiculum
nTPM: 15.5
1977 Female, age 85, both hemispheres 17.8
1901 Male, age 80, both hemispheres 16.2
2729 Female, age 91, right hemisphere 15.4
2619 Male, age 74, both hemispheres 14.9
2042 Male, age 76, both hemispheres 14.6
2438 Female, age 94, left hemisphere 14.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.0
Samples: 197

Max nTPM: 26.5
Min nTPM: 6.7
Std nTPM: 3.8
Median nTPM: 12.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 26.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 23.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 23.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 22.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 22.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 22.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 22.1
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 21.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 20.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 20.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.5
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 14.8
Min nTPM: 12.2
Sample A Female 14.8
Sample B Female 14.7
Sample C Male 12.2
Sample D Male 12.9
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.0
Sample A Female 13.7
Sample B Female 11.5
Sample C Male 11.3
Sample D Male 10.0
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 12.9
Min nTPM: 11.4
Sample A Female 12.9
Sample B Female 12.0
Sample C Male 12.2
Sample D Male 11.4
Ventral hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 14.8
Min nTPM: 9.7
Sample A Female 11.7
Sample B Female 9.7
Sample C Male 13.7
Sample D Male 14.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.9
Samples: 4

Max nTPM: 48.8
Min nTPM: 44.4
Sample A Male 46.4
Sample B Male 48.0
Sample C Female 48.8
Sample D Female 44.4
Hippocampal formation
nTPM: 53.8
Samples: 4

Max nTPM: 58.8
Min nTPM: 48.9
Sample A Male 58.8
Sample B Male 56.4
Sample C Female 48.9
Sample D Female 50.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
69262116 Antisense, RP_050224_01_B01, Mouse strain C57BL/6J (56 days, male) 2.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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