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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		151.958
RNA expressioni
Consensus:43.2 nTPM
HPA:43.2 nTPM
GTEx:11.0 nTPM
FANTOM5:37.1 Scaled Tags Per Million
Pig:25.3 nTPM
Mouse:26.0 nTPM
Allen mouse:5.1 Expression energy

AMYGDALA - Mouse brain profilei , antibody CAB079777
Amygdala mean intensity 151.958
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 55.422
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 24.061
Cortical amygdala 45.440
Central amygdala 151.958
Medial amygdaloid nucleus 22.019

AMYGDALA - HPA Brain RNA-seq
Max nTPM 43.2
Sample id Sample description nTPM
Amygdala
nTPM: 4.1
2514 Male, age 75, right hemisphere 13.1
1987 Female, age 91, left hemisphere 5.1
2517 Female, age 94, left hemisphere 2.2
2695 Female, age 67, right hemisphere 0.4
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 20.1
2243 Female, age 91, right hemisphere 101.6
2609 Male, age 75, right hemisphere 12.6
2110 Male, age 80, left hemisphere 4.0
2685 Female, age 94, left hemisphere 1.8
2827 Female, age 67, right hemisphere 0.4
1955 Male, age 76, both hemispheres 0.0
Central amygdala
nTPM: 2.6
2239 Male, age 80, left hemisphere 8.1
2826 Female, age 94, left hemisphere 3.6
2515 Male, age 75, right hemisphere 1.2
1905 Male, age 76, both hemispheres 0.0
2701 Female, age 91, right hemisphere 0.0
Corticomedial amygdala
nTPM: 43.2
2829 Male, age 80, left hemisphere 124.1
2242 Female, age 91, right hemisphere 107.8
2428 Male, age 75, right hemisphere 20.0
2429 Female, age 94, left hemisphere 4.8
2535 Female, age 67, right hemisphere 1.5
2240 Male, age 76, both hemispheres 0.9
Lateral amygdala
nTPM: 2.4
2534 Female, age 94, left hemisphere 6.2
2256 Male, age 80, left hemisphere 3.1
1883 Male, age 76, both hemispheres 1.7
2516 Male, age 75, right hemisphere 1.7
2255 Female, age 91, right hemisphere 0.9
2830 Female, age 67, right hemisphere 0.9
Stria terminalis, bed nucleus
nTPM: 7.1
2486 Female, age 94, both hemispheres 13.4
1974 Female, age 91, both hemispheres 5.1
2201 Male, age 74, unknown 2.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 11.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 11.0
Samples: 152

Max nTPM: 122.6
Min nTPM: 0.0
Std nTPM: 16.2
Median nTPM: 5.4
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 122.6
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 84.2
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 66.9
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 64.2
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 59.6
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 55.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 42.4
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 40.3
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 35.2
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 33.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 33.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 37.1
FF:10151-102I7 76 years, female 37.1

AMYGDALA - Pig RNA-seqi
Average nTPM 25.3
Pig sample Sample description nTPM
Amygdala
nTPM: 25.3
Samples: 4

Max nTPM: 48.2
Min nTPM: 13.6
Sample A Female 48.2
Sample B Female 13.6
Sample C Male 14.3
Sample D Male 24.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 26.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 26.1
Samples: 4

Max nTPM: 31.6
Min nTPM: 23.8
Sample A Male 23.8
Sample B Male 24.3
Sample C Female 31.6
Sample D Female 24.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 5.1
71717084 Antisense, RP_050505_04_B03, Mouse strain C57BL/6J (56 days, male) 5.1
69782969 Antisense, RP_050505_04_B03, Mouse strain C57BL/6J (56 days, male) 2.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.