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TIMP1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:125.2 nTPM
HPA:125.2 nTPM
GTEx:97.2 nTPM
FANTOM5:58.0 Scaled Tags Per Million
Pig:56.5 nTPM
Mouse:1.1 nTPM
Allen mouse:0.3 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 125.2
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 106.9
2828 Female, age 72, unknown 110.2
2586 Male, age 75, left hemisphere 109.2
2666 Male, age 74, left hemisphere 108.8
1870 Female, age 42, unknown 108.2
1833 Male, age 53, unknown 106.8
1830 Male, age 51, unknown 106.0
2219 Male, age 76, both hemispheres 105.8
1827 Male, age 72, unknown 105.7
2019 Male, age 18, unknown 104.4
2411 Female, age 72, unknown 104.1
Dorsal raphe nucleus
nTPM: 111.3
2750 Male, age 76, both hemispheres 112.4
2016 Female, age 72, unknown 111.9
2047 Male, age 72, unknown 111.5
2298 Female, age 72, unknown 110.5
1828 Male, age 53, unknown 110.3
Inferior colliculus
nTPM: 110.1
1890 Male, age 53, unknown 114.3
1848 Female, age 42, unknown 109.9
2849 Male, age 72, unknown 109.4
2097 Female, age 72, unknown 106.9
Median raphe nucleus
nTPM: 112.1
2220 Male, age 76, midline 112.1
Pedunculopontine tegmental nucleus
nTPM: 125.2
2338 Male, age 61, both hemispheres 158.3
2334 Male, age 80, both hemispheres 112.4
1921 Female, age 85, both hemispheres 104.9
Periaquaductal grey, anterior
nTPM: 109.7
1795 Male, age 51, unknown 110.9
2502 Female, age 75, unknown 110.5
1947 Male, age 18, unknown 107.7
Periaquaductal grey, dorsal
nTPM: 112.5
2850 Male, age 76, both hemispheres 115.7
1831 Male, age 72, unknown 113.9
1840 Male, age 53, unknown 113.2
2464 Female, age 72, unknown 107.2
Periaquaductal grey, lateral
nTPM: 114.4
2140 Male, age 76, both hemispheres 115.8
2053 Male, age 18, unknown 114.3
2272 Male, age 74, both hemispheres 113.0
Pretectal area
nTPM: 108.0
2825 Male, age 18, unknown 114.2
2273 Male, age 74, both hemispheres 112.1
2316 Male, age 76, right hemisphere 109.2
2667 Female, age 75, unknown 107.7
2224 Female, age 72, unknown 107.5
1944 Female, age 72, unknown 107.2
1817 Female, age 42, unknown 106.9
2407 Male, age 75, both hemispheres 106.6
1815 Male, age 53, unknown 106.0
1816 Male, age 51, unknown 106.0
2007 Male, age 72, unknown 104.6
Red nucleus
nTPM: 108.7
2823 Male, age 76, right hemisphere 112.4
2227 Male, age 72, unknown 110.3
2725 Female, age 75, unknown 110.0
2584 Male, age 75, left hemisphere 109.9
1821 Female, age 72, unknown 109.4
2503 Female, age 72, unknown 109.4
1954 Female, age 42, unknown 109.1
2769 Male, age 72, unknown 108.8
1904 Male, age 53, unknown 108.3
1865 Male, age 51, unknown 108.0
2588 Male, age 74, left hemisphere 105.9
2785 Male, age 18, unknown 103.2
Substantia nigra
nTPM: 109.9
2699 Male, age 18, unknown 119.6
1851 Male, age 51, unknown 112.3
1916 Female, age 42, unknown 111.1
2665 Male, age 74, both hemispheres 110.4
2590 Female, age 75, unknown 108.7
2409 Female, age 72, unknown 108.5
2241 Male, age 72, unknown 108.1
1889 Female, age 72, unknown 108.0
2583 Male, age 75, right hemisphere 106.8
1941 Male, age 53, unknown 106.0
Superior colliculus
nTPM: 108.6
1995 Male, age 72, unknown 112.5
1839 Male, age 51, unknown 109.9
1913 Female, age 42, unknown 109.7
1796 Male, age 53, unknown 109.2
2587 Male, age 74, left hemisphere 109.2
2664 Male, age 75, both hemispheres 107.3
2668 Female, age 75, unknown 107.3
2087 Female, age 72, unknown 106.9
2261 Male, age 18, unknown 106.9
1895 Male, age 76, right hemisphere 106.7
Ventral tegmental area
nTPM: 112.5
1915 Female, age 42, unknown 117.5
2021 Male, age 53, unknown 114.5
2218 Male, age 76, both hemispheres 112.7
2223 Female, age 72, unknown 112.7
1942 Male, age 51, unknown 110.5
2410 Female, age 72, unknown 107.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 97.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 97.2
Samples: 139

Max nTPM: 642.6
Min nTPM: 8.4
Std nTPM: 97.3
Median nTPM: 65.0
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 642.6
GTEX-XMD1-0011-R2B-SM-4AT5N 60-69 years, male 524.3
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 430.5
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 407.0
GTEX-11TUW-0011-R2b-SM-DO92T 60-69 years, male 377.3
GTEX-YFC4-0011-R2a-SM-4V6DZ 40-49 years, female 303.7
GTEX-12WSF-0011-R2a-SM-5DUVU 70-79 years, male 295.1
GTEX-NL4W-0011-R2a-SM-2I5GV 50-59 years, male 274.1
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 273.1
GTEX-14C5O-0011-R2a-SM-5ZZV2 60-69 years, male 251.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z 60-69 years, male 235.3
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 58.0
FF:10158-103A5 76 years, female 58.0

MIDBRAIN - Pig RNA-seqi
Average nTPM 56.5
Pig sample Sample description nTPM
Midbrain
nTPM: 17.6
Samples: 4

Max nTPM: 30.0
Min nTPM: 9.8
Sample A Female 30.0
Sample B Female 17.5
Sample C Male 12.9
Sample D Male 9.8
Periaqueductal gray
nTPM: 18.8
Samples: 3

Max nTPM: 20.7
Min nTPM: 16.7
Sample B Female 16.7
Sample C Male 19.1
Sample D Male 20.7
Substantia nigra
nTPM: 26.7
Samples: 4

Max nTPM: 51.7
Min nTPM: 13.9
Sample A Female 21.5
Sample B Female 51.7
Sample C Male 13.9
Sample D Male 19.5
Superior colliculi
nTPM: 56.5
Samples: 4

Max nTPM: 137.8
Min nTPM: 11.9
Sample A Female 60.5
Sample B Female 137.8
Sample C Male 11.9
Sample D Male 15.8

MIDBRAIN - Mouse RNA-seqi
Average nTPM 1.1
Mouse sample Sample description nTPM
Midbrain
nTPM: 1.2
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.7
Sample A Male 1.0
Sample B Male 0.7
Sample C Female 1.3
Sample D Female 1.6

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.3
68668108 Antisense, RP_050203_01_D10, Mouse strain C57BL/6J (56 days, male) 0.6
77790730 Antisense, RP_070208_04_B03, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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