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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:88.4 nTPM
HPA:88.4 nTPM
GTEx:87.7 nTPM
FANTOM5:152.6 Scaled Tags Per Million
Pig:56.5 nTPM
Mouse:8.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040915Antibody HPA040956
Glial cells Not detectedNot detected
Neuronal cells MediumLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.4
Sample id Sample description nTPM
Hippocampus
nTPM: 85.9
1898 Male, age 80, left hemisphere 92.9
1855 Male, age 76, left hemisphere 87.9
2529 Female, age 94, left hemisphere 87.4
2621 Female, age 67, right hemisphere 85.5
2148 Female, age 91, left hemisphere 81.4
1911 Female, age 85, right hemisphere 80.2
Dentate gyrus
nTPM: 87.4
2530 Female, age 94, left hemisphere 101.3
2010 Male, age 76, both hemispheres 93.5
2246 Female, age 85, both hemispheres 86.8
2528 Male, age 74, both hemispheres 82.7
1927 Female, age 91, both hemispheres 81.8
2531 Female, age 67, both hemispheres 78.0
Entorhinal gyrus
nTPM: 84.9
1938 Female, age 85, left hemisphere 89.1
1787 Male, age 76, left hemisphere 87.8
2764 Male, age 80, right hemisphere 86.3
2117 Female, age 91, right hemisphere 85.1
2613 Female, age 94, left hemisphere 82.5
2686 Male, age 75, right hemisphere 78.8
Hippocampus, CA1
nTPM: 88.4
2749 Male, age 80, left hemisphere 106.5
2527 Male, age 74, both hemispheres 87.7
1873 Female, age 85, both hemispheres 85.5
2045 Male, age 76, both hemispheres 82.6
2082 Female, age 91, right hemisphere 79.9
Hippocampus, CA2
nTPM: 87.3
1963 Male, age 80, left hemisphere 94.5
1892 Male, age 76, both hemispheres 91.0
2437 Female, age 94, left hemisphere 90.2
2249 Male, age 74, both hemispheres 86.8
2113 Female, age 91, right hemisphere 80.8
1940 Female, age 85, left hemisphere 80.6
Hippocampus, CA3
nTPM: 82.8
2137 Male, age 80, left hemisphere 90.5
1867 Male, age 76, both hemispheres 84.1
2861 Female, age 67, both hemispheres 83.3
2436 Male, age 74, both hemispheres 81.3
2620 Female, age 94, left hemisphere 79.1
1891 Female, age 85, both hemispheres 78.6
Parahippocampal cortex
nTPM: 84.7
2245 Female, age 91, both hemispheres 92.9
2250 Female, age 67, right hemisphere 88.4
2018 Male, age 76, both hemispheres 86.1
2532 Female, age 72, left hemisphere 86.1
1933 Female, age 85, both hemispheres 85.7
2692 Male, age 74, both hemispheres 83.5
1850 Male, age 80, both hemispheres 83.1
1990 Female, age 91, right hemisphere 82.4
2622 Female, age 67, right hemisphere 82.2
2693 Female, age 94, both hemispheres 76.8
Perirhinal gyrus
nTPM: 86.6
1794 Male, age 80, right hemisphere 88.3
1847 Female, age 91, left hemisphere 88.1
2521 Female, age 94, right hemisphere 87.0
1841 Female, age 85, right hemisphere 85.7
2848 Male, age 76, right hemisphere 83.9
Subiculum
nTPM: 85.5
2438 Female, age 94, left hemisphere 92.1
1977 Female, age 85, both hemispheres 87.4
2042 Male, age 76, both hemispheres 85.7
1901 Male, age 80, both hemispheres 85.3
2619 Male, age 74, both hemispheres 82.3
2729 Female, age 91, right hemisphere 80.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.7
Samples: 197

Max nTPM: 156.5
Min nTPM: 39.0
Std nTPM: 20.7
Median nTPM: 85.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 156.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 154.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 146.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 144.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 139.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 138.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 138.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 137.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 128.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 126.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 125.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 152.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.6
FF:10169-103B7 60 years, female 183.1
FF:10153-102I9 76 years, female 122.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.5
Samples: 4

Max nTPM: 73.0
Min nTPM: 40.2
Sample A Female 73.0
Sample B Female 53.0
Sample C Male 59.7
Sample D Male 40.2
Entorhinal cortex
nTPM: 46.0
Samples: 4

Max nTPM: 51.1
Min nTPM: 41.0
Sample A Female 51.1
Sample B Female 47.3
Sample C Male 44.5
Sample D Male 41.0
Subiculum
nTPM: 48.2
Samples: 4

Max nTPM: 57.5
Min nTPM: 44.3
Sample A Female 57.5
Sample B Female 45.6
Sample C Male 44.3
Sample D Male 45.2
Ventral hippocampus
nTPM: 49.8
Samples: 4

Max nTPM: 57.4
Min nTPM: 36.2
Sample A Female 51.0
Sample B Female 36.2
Sample C Male 57.4
Sample D Male 54.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 10.8
Min nTPM: 3.6
Sample A Male 3.6
Sample B Male 9.7
Sample C Female 10.8
Sample D Female 6.9
Hippocampal formation
nTPM: 8.4
Samples: 4

Max nTPM: 10.2
Min nTPM: 6.5
Sample A Male 7.9
Sample B Male 10.2
Sample C Female 6.5
Sample D Female 9.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.