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VAC14
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.8 nTPM
HPA:20.8 nTPM
GTEx:22.9 nTPM
FANTOM5:47.6 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:14.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027766
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.8
Sample id Sample description nTPM
Hippocampus
nTPM: 20.1
2148 Female, age 91, left hemisphere 21.3
1855 Male, age 76, left hemisphere 20.7
1898 Male, age 80, left hemisphere 20.5
2529 Female, age 94, left hemisphere 20.5
2621 Female, age 67, right hemisphere 20.0
1911 Female, age 85, right hemisphere 17.8
Dentate gyrus
nTPM: 20.8
2531 Female, age 67, both hemispheres 21.8
2530 Female, age 94, left hemisphere 21.7
2528 Male, age 74, both hemispheres 21.6
2246 Female, age 85, both hemispheres 20.1
2010 Male, age 76, both hemispheres 19.7
1927 Female, age 91, both hemispheres 19.6
Entorhinal gyrus
nTPM: 20.6
2613 Female, age 94, left hemisphere 23.7
2764 Male, age 80, right hemisphere 21.7
1938 Female, age 85, left hemisphere 20.8
1787 Male, age 76, left hemisphere 19.7
2117 Female, age 91, right hemisphere 19.3
2686 Male, age 75, right hemisphere 18.1
Hippocampus, CA1
nTPM: 19.8
2749 Male, age 80, left hemisphere 21.5
2045 Male, age 76, both hemispheres 20.3
2527 Male, age 74, both hemispheres 19.7
1873 Female, age 85, both hemispheres 19.6
2082 Female, age 91, right hemisphere 18.1
Hippocampus, CA2
nTPM: 19.8
1963 Male, age 80, left hemisphere 21.6
1892 Male, age 76, both hemispheres 21.2
2437 Female, age 94, left hemisphere 20.7
2249 Male, age 74, both hemispheres 18.8
2113 Female, age 91, right hemisphere 18.2
1940 Female, age 85, left hemisphere 18.1
Hippocampus, CA3
nTPM: 20.4
2620 Female, age 94, left hemisphere 23.0
2861 Female, age 67, both hemispheres 21.4
2137 Male, age 80, left hemisphere 20.4
1867 Male, age 76, both hemispheres 19.8
2436 Male, age 74, both hemispheres 19.4
1891 Female, age 85, both hemispheres 18.6
Parahippocampal cortex
nTPM: 18.9
1850 Male, age 80, both hemispheres 20.1
1990 Female, age 91, right hemisphere 19.7
2245 Female, age 91, both hemispheres 19.4
1933 Female, age 85, both hemispheres 19.3
2532 Female, age 72, left hemisphere 18.8
2692 Male, age 74, both hemispheres 18.8
2622 Female, age 67, right hemisphere 18.4
2693 Female, age 94, both hemispheres 18.3
2250 Female, age 67, right hemisphere 18.0
2018 Male, age 76, both hemispheres 17.8
Perirhinal gyrus
nTPM: 19.5
1847 Female, age 91, left hemisphere 20.9
1794 Male, age 80, right hemisphere 20.4
2521 Female, age 94, right hemisphere 19.6
2848 Male, age 76, right hemisphere 18.3
1841 Female, age 85, right hemisphere 18.0
Subiculum
nTPM: 19.0
1977 Female, age 85, both hemispheres 19.7
2619 Male, age 74, both hemispheres 19.4
2729 Female, age 91, right hemisphere 19.2
1901 Male, age 80, both hemispheres 19.0
2438 Female, age 94, left hemisphere 18.6
2042 Male, age 76, both hemispheres 17.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.9
Samples: 197

Max nTPM: 42.8
Min nTPM: 8.6
Std nTPM: 6.0
Median nTPM: 22.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 42.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 42.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 40.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 37.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 37.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 35.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 34.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 34.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 33.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 33.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.6
FF:10153-102I9 76 years, female 49.2
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 21.2
Min nTPM: 14.3
Sample A Female 21.2
Sample B Female 17.5
Sample C Male 14.9
Sample D Male 14.3
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 19.6
Min nTPM: 15.1
Sample A Female 18.7
Sample B Female 16.5
Sample C Male 19.6
Sample D Male 15.1
Subiculum
nTPM: 16.8
Samples: 4

Max nTPM: 22.0
Min nTPM: 14.3
Sample A Female 22.0
Sample B Female 15.4
Sample C Male 15.5
Sample D Male 14.3
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 21.3
Min nTPM: 12.4
Sample A Female 17.3
Sample B Female 12.4
Sample C Male 21.3
Sample D Male 18.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 15.6
Min nTPM: 13.1
Sample A Male 13.8
Sample B Male 13.1
Sample C Female 14.0
Sample D Female 15.6
Hippocampal formation
nTPM: 13.5
Samples: 4

Max nTPM: 13.7
Min nTPM: 13.4
Sample A Male 13.5
Sample B Male 13.4
Sample C Female 13.7
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74357721 Antisense, RP_060119_03_C05, Mouse strain C57BL/6J (56 days, male) 0.2
80525751 Antisense, RP_071204_02_E09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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