ABOUTMENU
HELP
NEWS
UBE2I
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:44.0 nTPM
HPA:44.0 nTPM
GTEx:50.0 nTPM
FANTOM5:131.0 Scaled Tags Per Million
Pig:36.5 nTPM
Mouse:190.7 nTPM
Allen mouse:4.2 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA003909Antibody CAB009021
Glial cells Not detectedNot detected
Neuronal cells -Low





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 44.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 42.4
1857 Female, age 85, left hemisphere 44.6
2846 Female, age 79, unknown 44.0
1854 Male, age 80, left hemisphere 43.0
2290 Female, age 72, unknown 43.0
2288 Male, age 75, left hemisphere 41.9
2481 Female, age 94, left hemisphere 41.7
1781 Male, age 74, unknown 41.5
2289 Male, age 61, right hemisphere 39.4
Claustrum
nTPM: 40.0
2196 Female, age 79, unknown 42.4
2645 Female, age 72, unknown 40.8
1956 Male, age 74, unknown 40.7
2198 Male, age 80, both hemispheres 40.3
2392 Female, age 94, both hemispheres 40.0
2568 Male, age 61, both hemispheres 39.9
2284 Female, age 91, both hemispheres 39.7
2491 Male, age 75, both hemispheres 39.6
2292 Female, age 85, both hemispheres 37.0
Globus pallidus, externus
nTPM: 37.9
1996 Male, age 80, right hemisphere 39.5
2395 Male, age 75, both hemispheres 38.9
2772 Female, age 79, unknown 38.7
2646 Male, age 61, right hemisphere 36.7
2567 Female, age 72, unknown 35.9
Globus pallidus, internus
nTPM: 37.9
2287 Male, age 75, right hemisphere 40.1
2483 Female, age 94, right hemisphere 40.1
2778 Female, age 91, both hemispheres 38.4
1818 Male, age 74, unknown 38.3
2037 Male, age 80, right hemisphere 37.5
2111 Female, age 85, right hemisphere 35.7
2566 Female, age 72, unknown 35.1
Nucleus accumbens
nTPM: 42.4
1856 Female, age 91, right hemisphere 47.5
2698 Female, age 72, unknown 43.2
1806 Female, age 85, left hemisphere 43.1
1783 Male, age 74, unknown 42.9
2286 Male, age 75, left hemisphere 42.3
2824 Male, age 61, right hemisphere 40.9
2732 Male, age 80, right hemisphere 40.1
2391 Female, age 94, left hemisphere 38.9
Nucleus basalis of Meynert
nTPM: 39.4
2393 Male, age 80, right hemisphere 40.0
2821 Male, age 75, both hemispheres 40.0
2484 Female, age 94, left hemisphere 39.4
2569 Male, age 61, both hemispheres 38.2
Nucleus of the diagonal band
nTPM: 44.0
1979 Male, age 74, unknown 45.5
2195 Female, age 85, both hemispheres 44.7
1812 Female, age 91, both hemispheres 44.5
2775 Male, age 80, right hemisphere 43.0
2029 Male, age 61, right hemisphere 42.6
Olfactory tubercle
nTPM: 42.2
1846 Male, age 80, right hemisphere 45.9
1998 Female, age 91, both hemispheres 42.7
2487 Female, age 94, left hemisphere 41.0
2856 Male, age 75, right hemisphere 39.3
Putamen
nTPM: 41.8
1838 Male, age 80, right hemisphere 43.4
1937 Female, age 91, right hemisphere 43.3
2466 Female, age 79, unknown 42.7
2482 Female, age 94, left hemisphere 42.4
2647 Male, age 75, left hemisphere 40.6
1829 Male, age 74, unknown 40.5
2489 Female, age 72, unknown 39.8
Septal nuclei
nTPM: 42.7
1960 Male, age 74, unknown 46.4
2031 Female, age 72, unknown 44.8
2629 Female, age 94, right hemisphere 43.5
2059 Female, age 85, both hemispheres 42.8
2009 Female, age 91, both hemispheres 42.4
2199 Male, age 80, right hemisphere 39.6
2394 Male, age 61, left hemisphere 39.4

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 50.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 44.5
Samples: 246

Max nTPM: 67.6
Min nTPM: 31.0
Std nTPM: 5.9
Median nTPM: 44.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 67.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 65.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 60.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 59.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 57.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 57.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 57.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 56.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 56.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 55.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 55.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 50.0
Samples: 246

Max nTPM: 73.1
Min nTPM: 32.1
Std nTPM: 7.8
Median nTPM: 50.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 73.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 67.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 67.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 64.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 64.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 64.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 64.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 63.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 63.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 63.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 62.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 44.2
Samples: 205

Max nTPM: 72.7
Min nTPM: 22.7
Std nTPM: 6.3
Median nTPM: 43.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 72.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 63.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 62.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 59.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 58.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 57.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 57.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 56.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 56.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 55.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 131.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 116.5
FF:10164-103B2 76 years, female 116.5
Globus pallidus
Scaled Tags Per Million: 87.6
FF:10175-103C4 60 years, female 98.6
FF:10161-103A8 76 years, female 76.6
Nucleus accumbens
Scaled Tags Per Million: 116.7
FF:10037-101F1 23-56 years, mixed 116.7
Putamen
Scaled Tags Per Million: 131.0
FF:10176-103C5 60 years, female 131.0

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 36.5
Pig sample Sample description nTPM
Caudate
nTPM: 35.6
Samples: 4

Max nTPM: 41.6
Min nTPM: 31.7
Sample A Female 32.6
Sample B Female 36.6
Sample C Male 41.6
Sample D Male 31.7
Putamen
nTPM: 35.7
Samples: 4

Max nTPM: 41.1
Min nTPM: 31.7
Sample A Female 31.7
Sample B Female 31.9
Sample C Male 41.1
Sample D Male 38.2
Septum
nTPM: 36.5
Samples: 4

Max nTPM: 42.9
Min nTPM: 30.6
Sample A Female 42.9
Sample B Female 35.0
Sample C Male 37.3
Sample D Male 30.6
Ventral pallidum
nTPM: 33.6
Samples: 4

Max nTPM: 35.8
Min nTPM: 31.7
Sample A Female 31.7
Sample B Female 35.8
Sample C Male 33.2
Sample D Male 33.6

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 190.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 183.4
Samples: 4

Max nTPM: 195.6
Min nTPM: 174.2
Sample A Male 174.2
Sample B Male 185.5
Sample C Female 178.4
Sample D Female 195.6
Septum
nTPM: 190.7
Samples: 4

Max nTPM: 198.2
Min nTPM: 185.8
Sample A Male 185.8
Sample B Male 189.4
Sample C Female 189.3
Sample D Female 198.2
Ventral forebrain
nTPM: 177.1
Samples: 4

Max nTPM: 181.8
Min nTPM: 165.1
Sample A Male 179.6
Sample B Male 181.8
Sample C Female 181.7
Sample D Female 165.1

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.2
45666 Antisense, RP_040324_01_H03, Mouse strain C57BL/6J (56 days, male) 4.2
67936385 Antisense, RP_040324_01_H03, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 4.1
45666 Antisense, RP_040324_01_H03, Mouse strain C57BL/6J (56 days, male) 4.1
67936385 Antisense, RP_040324_01_H03, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.