ABOUTMENU
HELP
NEWS
MAZ
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:158.9 nTPM
HPA:158.9 nTPM
GTEx:121.7 nTPM
FANTOM5:109.9 Scaled Tags Per Million
Pig:83.2 nTPM
Mouse:94.5 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048315
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 158.9
Sample id Sample description nTPM
Hippocampus
nTPM: 158.2
2621 Female, age 67, right hemisphere 168.9
2529 Female, age 94, left hemisphere 164.1
2148 Female, age 91, left hemisphere 160.5
1855 Male, age 76, left hemisphere 153.8
1898 Male, age 80, left hemisphere 152.9
1911 Female, age 85, right hemisphere 149.2
Dentate gyrus
nTPM: 152.6
2531 Female, age 67, both hemispheres 162.4
2530 Female, age 94, left hemisphere 159.4
1927 Female, age 91, both hemispheres 152.4
2010 Male, age 76, both hemispheres 151.5
2246 Female, age 85, both hemispheres 146.1
2528 Male, age 74, both hemispheres 143.7
Entorhinal gyrus
nTPM: 158.9
2613 Female, age 94, left hemisphere 166.9
1787 Male, age 76, left hemisphere 163.0
2686 Male, age 75, right hemisphere 161.4
2764 Male, age 80, right hemisphere 160.2
1938 Female, age 85, left hemisphere 153.8
2117 Female, age 91, right hemisphere 147.9
Hippocampus, CA1
nTPM: 148.9
2749 Male, age 80, left hemisphere 161.8
1873 Female, age 85, both hemispheres 149.4
2045 Male, age 76, both hemispheres 147.0
2527 Male, age 74, both hemispheres 144.4
2082 Female, age 91, right hemisphere 142.0
Hippocampus, CA2
nTPM: 152.0
1963 Male, age 80, left hemisphere 173.3
1892 Male, age 76, both hemispheres 159.7
2437 Female, age 94, left hemisphere 153.1
1940 Female, age 85, left hemisphere 145.5
2113 Female, age 91, right hemisphere 141.5
2249 Male, age 74, both hemispheres 138.8
Hippocampus, CA3
nTPM: 154.5
2861 Female, age 67, both hemispheres 178.8
2620 Female, age 94, left hemisphere 163.8
2137 Male, age 80, left hemisphere 156.8
1867 Male, age 76, both hemispheres 149.3
1891 Female, age 85, both hemispheres 142.8
2436 Male, age 74, both hemispheres 135.3
Parahippocampal cortex
nTPM: 150.9
2622 Female, age 67, right hemisphere 163.0
2245 Female, age 91, both hemispheres 154.9
1933 Female, age 85, both hemispheres 152.1
2532 Female, age 72, left hemisphere 152.0
2692 Male, age 74, both hemispheres 150.2
2250 Female, age 67, right hemisphere 148.8
2018 Male, age 76, both hemispheres 148.3
2693 Female, age 94, both hemispheres 147.5
1990 Female, age 91, right hemisphere 146.5
1850 Male, age 80, both hemispheres 145.7
Perirhinal gyrus
nTPM: 151.7
2848 Male, age 76, right hemisphere 157.3
1847 Female, age 91, left hemisphere 152.8
1794 Male, age 80, right hemisphere 150.9
1841 Female, age 85, right hemisphere 149.7
2521 Female, age 94, right hemisphere 147.9
Subiculum
nTPM: 147.7
2619 Male, age 74, both hemispheres 152.0
1977 Female, age 85, both hemispheres 148.0
2729 Female, age 91, right hemisphere 147.5
2438 Female, age 94, left hemisphere 147.2
1901 Male, age 80, both hemispheres 146.9
2042 Male, age 76, both hemispheres 144.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 121.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 121.7
Samples: 197

Max nTPM: 261.1
Min nTPM: 53.0
Std nTPM: 37.6
Median nTPM: 118.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 261.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 253.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 239.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 237.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 226.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 207.7
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 196.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 190.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 189.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 187.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 186.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.9
FF:10153-102I9 76 years, female 132.0
FF:10169-103B7 60 years, female 87.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 83.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 74.5
Samples: 4

Max nTPM: 86.5
Min nTPM: 62.1
Sample A Female 86.5
Sample B Female 78.5
Sample C Male 70.9
Sample D Male 62.1
Entorhinal cortex
nTPM: 83.2
Samples: 4

Max nTPM: 98.0
Min nTPM: 66.9
Sample A Female 97.3
Sample B Female 66.9
Sample C Male 98.0
Sample D Male 70.6
Subiculum
nTPM: 78.4
Samples: 4

Max nTPM: 93.6
Min nTPM: 68.6
Sample A Female 93.6
Sample B Female 68.6
Sample C Male 82.0
Sample D Male 69.3
Ventral hippocampus
nTPM: 77.9
Samples: 4

Max nTPM: 99.0
Min nTPM: 60.6
Sample A Female 68.2
Sample B Female 60.6
Sample C Male 99.0
Sample D Male 83.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.5
Samples: 4

Max nTPM: 97.7
Min nTPM: 88.8
Sample A Male 97.7
Sample B Male 88.8
Sample C Female 94.3
Sample D Female 97.2
Hippocampal formation
nTPM: 88.5
Samples: 4

Max nTPM: 91.3
Min nTPM: 86.8
Sample A Male 86.8
Sample B Male 87.6
Sample C Female 91.3
Sample D Female 88.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
71488768 Antisense, RP_050825_02_D12, Mouse strain C57BL/6J (56 days, male) 5.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.