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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:13.7 nTPM
HPA:13.7 nTPM
GTEx:10.6 nTPM
FANTOM5:15.1 Scaled Tags Per Million
Pig:8.0 nTPM
Mouse:24.0 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016605
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 13.4
1898 Male, age 80, left hemisphere 14.4
1911 Female, age 85, right hemisphere 13.6
2621 Female, age 67, right hemisphere 13.4
2148 Female, age 91, left hemisphere 13.2
1855 Male, age 76, left hemisphere 13.1
2529 Female, age 94, left hemisphere 12.6
Dentate gyrus
nTPM: 13.5
2010 Male, age 76, both hemispheres 14.1
2246 Female, age 85, both hemispheres 13.8
1927 Female, age 91, both hemispheres 13.5
2528 Male, age 74, both hemispheres 13.4
2530 Female, age 94, left hemisphere 13.4
2531 Female, age 67, both hemispheres 13.0
Entorhinal gyrus
nTPM: 13.5
1787 Male, age 76, left hemisphere 13.8
2613 Female, age 94, left hemisphere 13.7
2117 Female, age 91, right hemisphere 13.4
2686 Male, age 75, right hemisphere 13.4
1938 Female, age 85, left hemisphere 13.3
2764 Male, age 80, right hemisphere 13.2
Hippocampus, CA1
nTPM: 13.5
1873 Female, age 85, both hemispheres 13.9
2082 Female, age 91, right hemisphere 13.9
2527 Male, age 74, both hemispheres 13.4
2749 Male, age 80, left hemisphere 13.4
2045 Male, age 76, both hemispheres 12.8
Hippocampus, CA2
nTPM: 13.7
1892 Male, age 76, both hemispheres 14.8
1940 Female, age 85, left hemisphere 14.0
1963 Male, age 80, left hemisphere 13.9
2113 Female, age 91, right hemisphere 13.4
2437 Female, age 94, left hemisphere 13.2
2249 Male, age 74, both hemispheres 13.1
Hippocampus, CA3
nTPM: 13.5
1891 Female, age 85, both hemispheres 14.1
1867 Male, age 76, both hemispheres 13.9
2137 Male, age 80, left hemisphere 13.4
2436 Male, age 74, both hemispheres 13.4
2861 Female, age 67, both hemispheres 13.1
2620 Female, age 94, left hemisphere 12.9
Parahippocampal cortex
nTPM: 13.5
2018 Male, age 76, both hemispheres 14.1
2692 Male, age 74, both hemispheres 13.8
1850 Male, age 80, both hemispheres 13.7
2693 Female, age 94, both hemispheres 13.7
1990 Female, age 91, right hemisphere 13.5
2532 Female, age 72, left hemisphere 13.5
2622 Female, age 67, right hemisphere 13.5
1933 Female, age 85, both hemispheres 13.4
2250 Female, age 67, right hemisphere 13.4
2245 Female, age 91, both hemispheres 12.4
Perirhinal gyrus
nTPM: 13.4
1794 Male, age 80, right hemisphere 13.7
1841 Female, age 85, right hemisphere 13.5
1847 Female, age 91, left hemisphere 13.4
2848 Male, age 76, right hemisphere 13.2
2521 Female, age 94, right hemisphere 12.9
Subiculum
nTPM: 13.5
2042 Male, age 76, both hemispheres 14.2
2729 Female, age 91, right hemisphere 14.2
1901 Male, age 80, both hemispheres 13.6
1977 Female, age 85, both hemispheres 13.0
2619 Male, age 74, both hemispheres 12.9
2438 Female, age 94, left hemisphere 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.6
Samples: 197

Max nTPM: 22.4
Min nTPM: 4.9
Std nTPM: 3.4
Median nTPM: 10.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 22.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 20.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 20.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 19.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 19.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 19.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 18.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 18.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 17.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 17.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 17.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.1
FF:10169-103B7 60 years, female 16.7
FF:10153-102I9 76 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 8.9
Min nTPM: 7.4
Sample A Female 8.9
Sample B Female 7.9
Sample C Male 7.4
Sample D Male 7.8
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.9
Sample A Female 7.5
Sample B Female 8.3
Sample C Male 6.9
Sample D Male 7.0
Subiculum
nTPM: 7.2
Samples: 4

Max nTPM: 7.7
Min nTPM: 6.6
Sample A Female 7.7
Sample B Female 7.2
Sample C Male 6.6
Sample D Male 7.2
Ventral hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.6
Sample A Female 8.2
Sample B Female 7.8
Sample C Male 6.7
Sample D Male 6.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 23.3
Min nTPM: 21.1
Sample A Male 21.1
Sample B Male 21.2
Sample C Female 22.2
Sample D Female 23.3
Hippocampal formation
nTPM: 24.0
Samples: 4

Max nTPM: 24.6
Min nTPM: 23.6
Sample A Male 23.6
Sample B Male 23.7
Sample C Female 24.6
Sample D Female 24.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
1924 Antisense, RP_040507_02_E02, Mouse strain C57BL/6J (56 days, male) 2.6
1925 Antisense, RP_040507_02_E02, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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