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RASL12
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:36.8 nTPM
HPA:36.8 nTPM
GTEx:21.7 nTPM
FANTOM5:33.5 Scaled Tags Per Million
Pig:7.6 nTPM
Mouse:2.5 nTPM
Allen mouse:0.0 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 36.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 16.6
2481 Female, age 94, left hemisphere 24.8
2289 Male, age 61, right hemisphere 17.2
1781 Male, age 74, unknown 16.9
1854 Male, age 80, left hemisphere 16.3
1857 Female, age 85, left hemisphere 16.3
2290 Female, age 72, unknown 15.1
2846 Female, age 79, unknown 13.2
2288 Male, age 75, left hemisphere 12.8
Claustrum
nTPM: 15.5
2196 Female, age 79, unknown 18.5
2491 Male, age 75, both hemispheres 18.4
2392 Female, age 94, both hemispheres 17.6
2198 Male, age 80, both hemispheres 15.6
2284 Female, age 91, both hemispheres 14.8
2568 Male, age 61, both hemispheres 13.9
2292 Female, age 85, both hemispheres 13.8
2645 Female, age 72, unknown 13.7
1956 Male, age 74, unknown 13.3
Globus pallidus, externus
nTPM: 34.4
1996 Male, age 80, right hemisphere 45.5
2646 Male, age 61, right hemisphere 44.1
2567 Female, age 72, unknown 30.7
2772 Female, age 79, unknown 26.4
2395 Male, age 75, both hemispheres 25.5
Globus pallidus, internus
nTPM: 36.8
2483 Female, age 94, right hemisphere 44.3
2037 Male, age 80, right hemisphere 39.7
2111 Female, age 85, right hemisphere 37.8
2566 Female, age 72, unknown 36.3
1818 Male, age 74, unknown 34.9
2287 Male, age 75, right hemisphere 34.3
2778 Female, age 91, both hemispheres 30.4
Nucleus accumbens
nTPM: 16.8
2732 Male, age 80, right hemisphere 26.0
2698 Female, age 72, unknown 18.8
1806 Female, age 85, left hemisphere 16.3
2391 Female, age 94, left hemisphere 16.3
1856 Female, age 91, right hemisphere 16.0
2824 Male, age 61, right hemisphere 14.6
2286 Male, age 75, left hemisphere 13.6
1783 Male, age 74, unknown 13.2
Nucleus basalis of Meynert
nTPM: 25.4
2569 Male, age 61, both hemispheres 49.0
2484 Female, age 94, left hemisphere 19.7
2821 Male, age 75, both hemispheres 16.8
2393 Male, age 80, right hemisphere 15.9
Nucleus of the diagonal band
nTPM: 15.5
1979 Male, age 74, unknown 21.5
1812 Female, age 91, both hemispheres 15.1
2775 Male, age 80, right hemisphere 14.4
2029 Male, age 61, right hemisphere 13.5
2195 Female, age 85, both hemispheres 13.0
Olfactory tubercle
nTPM: 12.8
2487 Female, age 94, left hemisphere 17.1
1846 Male, age 80, right hemisphere 12.2
2856 Male, age 75, right hemisphere 11.0
1998 Female, age 91, both hemispheres 10.9
Putamen
nTPM: 15.5
2482 Female, age 94, left hemisphere 18.6
2489 Female, age 72, unknown 17.4
1829 Male, age 74, unknown 16.6
2466 Female, age 79, unknown 15.4
1937 Female, age 91, right hemisphere 15.0
2647 Male, age 75, left hemisphere 13.3
1838 Male, age 80, right hemisphere 12.4
Septal nuclei
nTPM: 21.8
2199 Male, age 80, right hemisphere 38.6
2394 Male, age 61, left hemisphere 37.5
2059 Female, age 85, both hemispheres 23.3
2009 Female, age 91, both hemispheres 15.7
2629 Female, age 94, right hemisphere 13.4
2031 Female, age 72, unknown 12.5
1960 Male, age 74, unknown 11.9

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 21.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 21.7
Samples: 246

Max nTPM: 91.4
Min nTPM: 2.9
Std nTPM: 15.3
Median nTPM: 16.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 91.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 87.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 78.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 74.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 67.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 62.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 61.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 59.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 58.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 58.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 20.3
Samples: 246

Max nTPM: 136.0
Min nTPM: 3.8
Std nTPM: 14.7
Median nTPM: 15.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 136.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 101.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 69.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 63.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 62.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 57.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 56.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 52.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 47.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 46.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 46.4
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Brain - Putamen (basal ganglia)
Average nTPM: 15.7
Samples: 205

Max nTPM: 68.4
Min nTPM: 1.9
Std nTPM: 11.5
Median nTPM: 12.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 68.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 64.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 55.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 55.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 50.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 50.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 47.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 43.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 42.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 40.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 38.7
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 22.1
FF:10164-103B2 76 years, female 22.1
Globus pallidus
Scaled Tags Per Million: 33.5
FF:10175-103C4 60 years, female 40.2
FF:10161-103A8 76 years, female 26.9
Nucleus accumbens
Scaled Tags Per Million: 10.5
FF:10037-101F1 23-56 years, mixed 10.5
Putamen
Scaled Tags Per Million: 27.4
FF:10176-103C5 60 years, female 27.4

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 7.6
Pig sample Sample description nTPM
Caudate
nTPM: 7.1
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.3
Sample A Female 6.3
Sample B Female 7.5
Sample C Male 8.2
Sample D Male 6.4
Putamen
nTPM: 6.9
Samples: 4

Max nTPM: 8.6
Min nTPM: 5.5
Sample A Female 8.6
Sample B Female 5.5
Sample C Male 6.8
Sample D Male 6.5
Septum
nTPM: 7.6
Samples: 4

Max nTPM: 9.2
Min nTPM: 6.4
Sample A Female 6.8
Sample B Female 6.4
Sample C Male 9.2
Sample D Male 8.1
Ventral pallidum
nTPM: 6.5
Samples: 4

Max nTPM: 8.3
Min nTPM: 5.0
Sample A Female 5.0
Sample B Female 6.7
Sample C Male 8.3
Sample D Male 5.8

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 2.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2.5
Samples: 4

Max nTPM: 2.6
Min nTPM: 2.2
Sample A Male 2.6
Sample B Male 2.5
Sample C Female 2.2
Sample D Female 2.6
Septum
nTPM: 2.2
Samples: 4

Max nTPM: 2.5
Min nTPM: 1.8
Sample A Male 2.3
Sample B Male 2.2
Sample C Female 1.8
Sample D Female 2.5
Ventral forebrain
nTPM: 2.4
Samples: 4

Max nTPM: 2.9
Min nTPM: 1.9
Sample A Male 2.4
Sample B Male 2.2
Sample C Female 2.9
Sample D Female 1.9

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
71212036 Antisense, RP_050816_02_F07, Mouse strain C57BL/6J (56 days, male) 0.0
69818012 Antisense, RP_050510_04_C02, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
71212036 Antisense, RP_050816_02_F07, Mouse strain C57BL/6J (56 days, male) 0.0
69818012 Antisense, RP_050510_04_C02, Mouse strain C57BL/6J (56 days, male) 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.