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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		101.148
RNA expressioni
Consensus:71.0 nTPM
HPA:71.0 nTPM
GTEx:82.0 nTPM
FANTOM5:238.9 Scaled Tags Per Million
Pig:62.7 nTPM
Mouse:262.4 nTPM
Allen mouse:11.0 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA006880
Amygdala mean intensity 101.148
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 3.075
Basal medial amygdaloid nucleus 48.612
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 29.755
Cortical amygdala 40.500
Central amygdala 70.090
Medial amygdaloid nucleus 46.136

AMYGDALA - HPA Brain RNA-seq
Max nTPM 71.0
Sample id Sample description nTPM
Amygdala
nTPM: 64.3
2514 Male, age 75, right hemisphere 76.6
1987 Female, age 91, left hemisphere 75.5
2517 Female, age 94, left hemisphere 63.6
2814 Male, age 76, right hemisphere 57.5
2695 Female, age 67, right hemisphere 48.4
Basal amygdala
nTPM: 61.4
2243 Female, age 91, right hemisphere 71.4
2609 Male, age 75, right hemisphere 66.7
2685 Female, age 94, left hemisphere 63.8
2110 Male, age 80, left hemisphere 61.4
1955 Male, age 76, both hemispheres 59.6
2827 Female, age 67, right hemisphere 45.2
Central amygdala
nTPM: 59.5
2701 Female, age 91, right hemisphere 65.6
2239 Male, age 80, left hemisphere 65.1
2515 Male, age 75, right hemisphere 59.6
2826 Female, age 94, left hemisphere 54.0
1905 Male, age 76, both hemispheres 53.4
Corticomedial amygdala
nTPM: 66.2
2242 Female, age 91, right hemisphere 77.9
2429 Female, age 94, left hemisphere 75.4
2829 Male, age 80, left hemisphere 65.7
2428 Male, age 75, right hemisphere 65.3
2240 Male, age 76, both hemispheres 61.0
2535 Female, age 67, right hemisphere 52.2
Lateral amygdala
nTPM: 57.2
2255 Female, age 91, right hemisphere 64.9
2516 Male, age 75, right hemisphere 61.1
1883 Male, age 76, both hemispheres 59.7
2256 Male, age 80, left hemisphere 58.3
2534 Female, age 94, left hemisphere 57.6
2830 Female, age 67, right hemisphere 41.4
Stria terminalis, bed nucleus
nTPM: 71.0
1974 Female, age 91, both hemispheres 80.3
2486 Female, age 94, both hemispheres 71.0
2201 Male, age 74, unknown 61.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 82.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 82.0
Samples: 152

Max nTPM: 192.6
Min nTPM: 2.8
Std nTPM: 33.2
Median nTPM: 80.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 192.6
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 185.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 183.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 166.4
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 157.8
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 150.0
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 145.2
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 145.1
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 140.6
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 138.7
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 129.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 238.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 238.9
FF:10151-102I7 76 years, female 238.9

AMYGDALA - Pig RNA-seqi
Average nTPM 62.7
Pig sample Sample description nTPM
Amygdala
nTPM: 62.7
Samples: 4

Max nTPM: 73.8
Min nTPM: 51.6
Sample A Female 73.8
Sample B Female 51.6
Sample C Male 60.3
Sample D Male 64.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 262.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 262.4
Samples: 4

Max nTPM: 311.5
Min nTPM: 230.4
Sample A Male 230.4
Sample B Male 246.9
Sample C Female 311.5
Sample D Female 260.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 11.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 11.0
71608205 Antisense, RP_050927_01_B01, Mouse strain C57BL/6J (56 days, male) 11.0
73718057 Antisense, RP_050927_01_B01, Mouse strain C57BL/6J (56 days, male) 9.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.