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GDAP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:25.3 nTPM
HPA:25.3 nTPM
GTEx:26.8 nTPM
FANTOM5:98.2 Scaled Tags Per Million
Pig:35.1 nTPM
Mouse:57.6 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014266Antibody HPA024334
Glial cells LowNot detected
Neuronal cells HighMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.3
Sample id Sample description nTPM
Hippocampus
nTPM: 16.6
1898 Male, age 80, left hemisphere 22.2
1855 Male, age 76, left hemisphere 18.3
2621 Female, age 67, right hemisphere 18.0
2148 Female, age 91, left hemisphere 14.9
1911 Female, age 85, right hemisphere 14.7
2529 Female, age 94, left hemisphere 11.6
Dentate gyrus
nTPM: 16.5
1927 Female, age 91, both hemispheres 23.1
2246 Female, age 85, both hemispheres 17.5
2010 Male, age 76, both hemispheres 17.3
2531 Female, age 67, both hemispheres 15.2
2528 Male, age 74, both hemispheres 15.0
2530 Female, age 94, left hemisphere 11.0
Entorhinal gyrus
nTPM: 16.3
2613 Female, age 94, left hemisphere 21.5
1938 Female, age 85, left hemisphere 20.2
2764 Male, age 80, right hemisphere 17.1
1787 Male, age 76, left hemisphere 16.3
2686 Male, age 75, right hemisphere 11.8
2117 Female, age 91, right hemisphere 10.7
Hippocampus, CA1
nTPM: 20.7
2749 Male, age 80, left hemisphere 33.9
1873 Female, age 85, both hemispheres 21.3
2045 Male, age 76, both hemispheres 17.7
2527 Male, age 74, both hemispheres 16.7
2082 Female, age 91, right hemisphere 13.8
Hippocampus, CA2
nTPM: 17.8
1892 Male, age 76, both hemispheres 28.0
1963 Male, age 80, left hemisphere 21.8
1940 Female, age 85, left hemisphere 15.6
2249 Male, age 74, both hemispheres 14.6
2113 Female, age 91, right hemisphere 14.3
2437 Female, age 94, left hemisphere 12.5
Hippocampus, CA3
nTPM: 19.1
2137 Male, age 80, left hemisphere 30.6
2620 Female, age 94, left hemisphere 19.9
1867 Male, age 76, both hemispheres 19.4
2861 Female, age 67, both hemispheres 16.5
1891 Female, age 85, both hemispheres 14.2
2436 Male, age 74, both hemispheres 14.0
Parahippocampal cortex
nTPM: 18.3
1850 Male, age 80, both hemispheres 27.5
2693 Female, age 94, both hemispheres 22.3
2245 Female, age 91, both hemispheres 20.6
1933 Female, age 85, both hemispheres 19.6
1990 Female, age 91, right hemisphere 18.8
2250 Female, age 67, right hemisphere 18.0
2532 Female, age 72, left hemisphere 17.3
2692 Male, age 74, both hemispheres 15.6
2622 Female, age 67, right hemisphere 12.2
2018 Male, age 76, both hemispheres 10.8
Perirhinal gyrus
nTPM: 25.3
1847 Female, age 91, left hemisphere 27.7
1794 Male, age 80, right hemisphere 25.9
1841 Female, age 85, right hemisphere 24.9
2521 Female, age 94, right hemisphere 24.0
2848 Male, age 76, right hemisphere 24.0
Subiculum
nTPM: 13.6
1901 Male, age 80, both hemispheres 17.3
1977 Female, age 85, both hemispheres 16.9
2729 Female, age 91, right hemisphere 12.8
2438 Female, age 94, left hemisphere 12.4
2619 Male, age 74, both hemispheres 12.0
2042 Male, age 76, both hemispheres 10.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.8
Samples: 197

Max nTPM: 60.3
Min nTPM: 7.1
Std nTPM: 10.0
Median nTPM: 25.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 60.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 53.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 50.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 48.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 47.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 46.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 45.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 45.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 45.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 44.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 44.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.2
FF:10169-103B7 60 years, female 121.3
FF:10153-102I9 76 years, female 75.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.1
Samples: 4

Max nTPM: 42.5
Min nTPM: 27.8
Sample A Female 42.5
Sample B Female 41.0
Sample C Male 27.8
Sample D Male 29.1
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 32.1
Min nTPM: 26.9
Sample A Female 31.5
Sample B Female 32.1
Sample C Male 26.9
Sample D Male 27.0
Subiculum
nTPM: 30.7
Samples: 4

Max nTPM: 38.6
Min nTPM: 27.2
Sample A Female 38.6
Sample B Female 29.4
Sample C Male 27.7
Sample D Male 27.2
Ventral hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 35.1
Min nTPM: 24.5
Sample A Female 35.1
Sample B Female 24.5
Sample C Male 28.6
Sample D Male 34.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.5
Samples: 4

Max nTPM: 56.4
Min nTPM: 51.3
Sample A Male 51.3
Sample B Male 56.4
Sample C Female 53.6
Sample D Female 52.7
Hippocampal formation
nTPM: 57.6
Samples: 4

Max nTPM: 62.5
Min nTPM: 50.8
Sample A Male 59.4
Sample B Male 62.5
Sample C Female 57.5
Sample D Female 50.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
69104747 Antisense, RP_050316_02_B09, Mouse strain C57BL/6J (56 days, male) 4.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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