ABOUTMENU
HELP
NEWS
INTS10
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:44.4 nTPM
HPA:44.4 nTPM
GTEx:35.5 nTPM
FANTOM5:67.3 Scaled Tags Per Million
Pig:11.4 nTPM
Mouse:41.2 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039129Antibody HPA050570
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.4
Sample id Sample description nTPM
Hippocampus
nTPM: 42.5
1898 Male, age 80, left hemisphere 45.1
2621 Female, age 67, right hemisphere 43.4
1911 Female, age 85, right hemisphere 43.1
1855 Male, age 76, left hemisphere 41.3
2529 Female, age 94, left hemisphere 41.3
2148 Female, age 91, left hemisphere 41.0
Dentate gyrus
nTPM: 41.6
2246 Female, age 85, both hemispheres 43.6
2010 Male, age 76, both hemispheres 43.4
1927 Female, age 91, both hemispheres 42.3
2531 Female, age 67, both hemispheres 41.6
2528 Male, age 74, both hemispheres 41.1
2530 Female, age 94, left hemisphere 37.7
Entorhinal gyrus
nTPM: 42.2
1938 Female, age 85, left hemisphere 43.8
1787 Male, age 76, left hemisphere 43.3
2764 Male, age 80, right hemisphere 42.1
2117 Female, age 91, right hemisphere 41.8
2613 Female, age 94, left hemisphere 41.2
2686 Male, age 75, right hemisphere 41.1
Hippocampus, CA1
nTPM: 43.2
2749 Male, age 80, left hemisphere 46.9
2045 Male, age 76, both hemispheres 43.2
2082 Female, age 91, right hemisphere 42.1
1873 Female, age 85, both hemispheres 41.8
2527 Male, age 74, both hemispheres 41.7
Hippocampus, CA2
nTPM: 42.2
1892 Male, age 76, both hemispheres 43.8
1963 Male, age 80, left hemisphere 42.9
1940 Female, age 85, left hemisphere 42.2
2249 Male, age 74, both hemispheres 42.0
2437 Female, age 94, left hemisphere 41.4
2113 Female, age 91, right hemisphere 41.1
Hippocampus, CA3
nTPM: 41.8
2137 Male, age 80, left hemisphere 44.5
1867 Male, age 76, both hemispheres 42.6
1891 Female, age 85, both hemispheres 42.3
2620 Female, age 94, left hemisphere 41.3
2436 Male, age 74, both hemispheres 40.8
2861 Female, age 67, both hemispheres 39.4
Parahippocampal cortex
nTPM: 42.6
1850 Male, age 80, both hemispheres 46.6
2693 Female, age 94, both hemispheres 44.4
2250 Female, age 67, right hemisphere 43.5
1933 Female, age 85, both hemispheres 42.7
2018 Male, age 76, both hemispheres 42.5
1990 Female, age 91, right hemisphere 42.0
2622 Female, age 67, right hemisphere 41.8
2692 Male, age 74, both hemispheres 41.5
2245 Female, age 91, both hemispheres 41.3
2532 Female, age 72, left hemisphere 39.9
Perirhinal gyrus
nTPM: 44.4
1794 Male, age 80, right hemisphere 46.0
1841 Female, age 85, right hemisphere 45.5
2848 Male, age 76, right hemisphere 43.7
1847 Female, age 91, left hemisphere 43.4
2521 Female, age 94, right hemisphere 43.2
Subiculum
nTPM: 41.7
1901 Male, age 80, both hemispheres 44.5
2042 Male, age 76, both hemispheres 43.6
1977 Female, age 85, both hemispheres 42.2
2729 Female, age 91, right hemisphere 41.2
2619 Male, age 74, both hemispheres 40.9
2438 Female, age 94, left hemisphere 37.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.5
Samples: 197

Max nTPM: 70.1
Min nTPM: 15.5
Std nTPM: 8.9
Median nTPM: 33.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 70.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 67.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 60.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 54.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 54.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 53.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 52.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 51.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 51.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 50.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 50.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.3
FF:10169-103B7 60 years, female 75.3
FF:10153-102I9 76 years, female 59.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 13.1
Min nTPM: 10.6
Sample A Female 13.1
Sample B Female 11.1
Sample C Male 10.8
Sample D Male 10.6
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.0
Sample A Female 10.3
Sample B Female 11.1
Sample C Male 9.8
Sample D Male 8.0
Subiculum
nTPM: 9.9
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.0
Sample A Female 13.5
Sample B Female 9.1
Sample C Male 8.9
Sample D Male 8.0
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 12.0
Min nTPM: 9.1
Sample A Female 9.8
Sample B Female 9.1
Sample C Male 10.5
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.2
Samples: 4

Max nTPM: 41.4
Min nTPM: 31.8
Sample A Male 31.8
Sample B Male 41.4
Sample C Female 38.8
Sample D Female 32.6
Hippocampal formation
nTPM: 41.2
Samples: 4

Max nTPM: 49.1
Min nTPM: 34.8
Sample A Male 49.1
Sample B Male 41.1
Sample C Female 34.8
Sample D Female 39.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
81600554 Antisense, RP_080402_04_F07, Mouse strain C57BL/6J (56 days, male) 11.2
70430720 Antisense, RP_050614_01_H09, Mouse strain C57BL/6J (56 days, male) 9.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.