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SF3A2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:21.2 nTPM
HPA:21.2 nTPM
GTEx:24.2 nTPM
FANTOM5:68.8 Scaled Tags Per Million
Mouse:29.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042843Antibody HPA049439
Glial cells MediumLow
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.2
Sample id Sample description nTPM
Hippocampus
nTPM: 20.0
2621 Female, age 67, right hemisphere 23.7
2529 Female, age 94, left hemisphere 22.5
1855 Male, age 76, left hemisphere 20.7
2148 Female, age 91, left hemisphere 18.8
1911 Female, age 85, right hemisphere 18.7
1898 Male, age 80, left hemisphere 15.8
Dentate gyrus
nTPM: 19.7
2531 Female, age 67, both hemispheres 22.2
2530 Female, age 94, left hemisphere 22.0
2010 Male, age 76, both hemispheres 20.6
2246 Female, age 85, both hemispheres 20.0
1927 Female, age 91, both hemispheres 16.7
2528 Male, age 74, both hemispheres 16.6
Entorhinal gyrus
nTPM: 21.2
2686 Male, age 75, right hemisphere 23.9
2613 Female, age 94, left hemisphere 22.3
1787 Male, age 76, left hemisphere 21.3
2117 Female, age 91, right hemisphere 20.7
2764 Male, age 80, right hemisphere 20.0
1938 Female, age 85, left hemisphere 18.8
Hippocampus, CA1
nTPM: 18.1
2045 Male, age 76, both hemispheres 19.9
1873 Female, age 85, both hemispheres 19.2
2527 Male, age 74, both hemispheres 18.0
2082 Female, age 91, right hemisphere 17.6
2749 Male, age 80, left hemisphere 16.1
Hippocampus, CA2
nTPM: 17.5
2113 Female, age 91, right hemisphere 19.8
1940 Female, age 85, left hemisphere 18.9
2437 Female, age 94, left hemisphere 18.5
1892 Male, age 76, both hemispheres 17.4
2249 Male, age 74, both hemispheres 16.0
1963 Male, age 80, left hemisphere 14.6
Hippocampus, CA3
nTPM: 20.1
2620 Female, age 94, left hemisphere 26.5
2861 Female, age 67, both hemispheres 24.5
1867 Male, age 76, both hemispheres 19.4
1891 Female, age 85, both hemispheres 19.4
2137 Male, age 80, left hemisphere 16.5
2436 Male, age 74, both hemispheres 14.0
Parahippocampal cortex
nTPM: 21.1
2622 Female, age 67, right hemisphere 28.9
2532 Female, age 72, left hemisphere 23.1
2245 Female, age 91, both hemispheres 23.0
2692 Male, age 74, both hemispheres 22.3
2018 Male, age 76, both hemispheres 20.9
2693 Female, age 94, both hemispheres 19.4
1990 Female, age 91, right hemisphere 19.2
2250 Female, age 67, right hemisphere 18.5
1933 Female, age 85, both hemispheres 18.3
1850 Male, age 80, both hemispheres 17.9
Perirhinal gyrus
nTPM: 18.0
2848 Male, age 76, right hemisphere 20.9
1794 Male, age 80, right hemisphere 19.2
1841 Female, age 85, right hemisphere 17.0
2521 Female, age 94, right hemisphere 16.5
1847 Female, age 91, left hemisphere 16.4
Subiculum
nTPM: 20.6
2619 Male, age 74, both hemispheres 25.5
2042 Male, age 76, both hemispheres 22.2
2438 Female, age 94, left hemisphere 20.5
1901 Male, age 80, both hemispheres 19.9
1977 Female, age 85, both hemispheres 18.0
2729 Female, age 91, right hemisphere 17.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.2
Samples: 197

Max nTPM: 51.5
Min nTPM: 10.8
Std nTPM: 6.6
Median nTPM: 23.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 51.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 48.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 42.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 38.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 38.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 38.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 37.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 37.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 35.7
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 35.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 35.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.8
FF:10169-103B7 60 years, female 79.5
FF:10153-102I9 76 years, female 58.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 27.7
Min nTPM: 20.7
Sample A Male 20.7
Sample B Male 22.9
Sample C Female 22.7
Sample D Female 27.7
Hippocampal formation
nTPM: 29.7
Samples: 4

Max nTPM: 32.2
Min nTPM: 27.1
Sample A Male 27.1
Sample B Male 27.8
Sample C Female 31.5
Sample D Female 32.2

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.