ABOUTMENU
HELP
NEWS
C19orf53
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:159.9 nTPM
HPA:159.9 nTPM
GTEx:136.5 nTPM
FANTOM5:139.5 Scaled Tags Per Million
Pig:62.8 nTPM
Mouse:117.7 nTPM
Allen mouse:1.3 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 159.9
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 150.3
2666 Male, age 74, left hemisphere 156.4
1870 Female, age 42, unknown 155.5
2828 Female, age 72, unknown 152.0
2019 Male, age 18, unknown 151.4
2586 Male, age 75, left hemisphere 150.5
1827 Male, age 72, unknown 149.0
1833 Male, age 53, unknown 148.3
2411 Female, age 72, unknown 147.9
1830 Male, age 51, unknown 147.3
2219 Male, age 76, both hemispheres 144.7
Dorsal raphe nucleus
nTPM: 152.0
2298 Female, age 72, unknown 155.0
2047 Male, age 72, unknown 154.7
1828 Male, age 53, unknown 152.0
2750 Male, age 76, both hemispheres 152.0
2016 Female, age 72, unknown 146.4
Inferior colliculus
nTPM: 151.7
2849 Male, age 72, unknown 154.3
1890 Male, age 53, unknown 151.9
1848 Female, age 42, unknown 150.9
2097 Female, age 72, unknown 149.6
Median raphe nucleus
nTPM: 159.9
2220 Male, age 76, midline 159.9
Pedunculopontine tegmental nucleus
nTPM: 154.1
2334 Male, age 80, both hemispheres 157.4
2338 Male, age 61, both hemispheres 154.7
1921 Female, age 85, both hemispheres 150.3
Periaquaductal grey, anterior
nTPM: 152.5
1947 Male, age 18, unknown 154.5
1795 Male, age 51, unknown 151.9
2502 Female, age 75, unknown 151.0
Periaquaductal grey, dorsal
nTPM: 150.3
2850 Male, age 76, both hemispheres 157.3
1840 Male, age 53, unknown 151.4
1831 Male, age 72, unknown 148.0
2464 Female, age 72, unknown 144.4
Periaquaductal grey, lateral
nTPM: 148.0
2272 Male, age 74, both hemispheres 149.4
2053 Male, age 18, unknown 147.3
2140 Male, age 76, both hemispheres 147.2
Pretectal area
nTPM: 153.5
1944 Female, age 72, unknown 162.3
2007 Male, age 72, unknown 159.0
1817 Female, age 42, unknown 158.3
2667 Female, age 75, unknown 158.1
1816 Male, age 51, unknown 155.3
1815 Male, age 53, unknown 153.8
2825 Male, age 18, unknown 151.1
2407 Male, age 75, both hemispheres 150.4
2224 Female, age 72, unknown 149.7
2273 Male, age 74, both hemispheres 147.7
2316 Male, age 76, right hemisphere 143.3
Red nucleus
nTPM: 153.8
1821 Female, age 72, unknown 159.3
2503 Female, age 72, unknown 156.7
1865 Male, age 51, unknown 156.2
2769 Male, age 72, unknown 156.0
2725 Female, age 75, unknown 155.2
2785 Male, age 18, unknown 154.0
2823 Male, age 76, right hemisphere 153.4
1954 Female, age 42, unknown 153.2
2227 Male, age 72, unknown 152.6
1904 Male, age 53, unknown 152.1
2584 Male, age 75, left hemisphere 150.9
2588 Male, age 74, left hemisphere 146.4
Substantia nigra
nTPM: 155.5
1916 Female, age 42, unknown 165.3
1889 Female, age 72, unknown 160.9
2665 Male, age 74, both hemispheres 160.5
1851 Male, age 51, unknown 159.5
2699 Male, age 18, unknown 158.3
1941 Male, age 53, unknown 157.8
2409 Female, age 72, unknown 150.5
2583 Male, age 75, right hemisphere 148.5
2241 Male, age 72, unknown 147.3
2590 Female, age 75, unknown 146.7
Superior colliculus
nTPM: 151.6
2587 Male, age 74, left hemisphere 157.1
2668 Female, age 75, unknown 155.7
1796 Male, age 53, unknown 154.5
1913 Female, age 42, unknown 152.6
1995 Male, age 72, unknown 150.8
2664 Male, age 75, both hemispheres 150.8
1839 Male, age 51, unknown 149.1
2087 Female, age 72, unknown 148.7
1895 Male, age 76, right hemisphere 148.5
2261 Male, age 18, unknown 147.8
Ventral tegmental area
nTPM: 153.9
1915 Female, age 42, unknown 158.3
2218 Male, age 76, both hemispheres 157.3
2410 Female, age 72, unknown 156.6
1942 Male, age 51, unknown 151.4
2223 Female, age 72, unknown 150.7
2021 Male, age 53, unknown 148.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 136.5
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 136.5
Samples: 139

Max nTPM: 282.4
Min nTPM: 66.2
Std nTPM: 32.7
Median nTPM: 132.9
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 282.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 264.6
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 216.6
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 215.0
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 204.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT 60-69 years, male 196.7
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 195.5
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 192.7
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 191.5
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 191.4
GTEX-1399T-0011-R2b-SM-5DUXM 60-69 years, male 189.1
Show allShow less

MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 139.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 139.5
FF:10158-103A5 76 years, female 139.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 62.8
Pig sample Sample description nTPM
Midbrain
nTPM: 62.9
Samples: 4

Max nTPM: 85.5
Min nTPM: 50.3
Sample A Female 85.5
Sample B Female 58.8
Sample C Male 56.8
Sample D Male 50.3
Periaqueductal gray
nTPM: 52.1
Samples: 3

Max nTPM: 59.7
Min nTPM: 47.3
Sample B Female 47.3
Sample C Male 59.7
Sample D Male 49.3
Substantia nigra
nTPM: 61.5
Samples: 4

Max nTPM: 76.4
Min nTPM: 51.3
Sample A Female 76.4
Sample B Female 52.9
Sample C Male 65.2
Sample D Male 51.3
Superior colliculi
nTPM: 60.0
Samples: 4

Max nTPM: 70.1
Min nTPM: 52.9
Sample A Female 70.1
Sample B Female 52.9
Sample C Male 60.7
Sample D Male 56.1

MIDBRAIN - Mouse RNA-seqi
Average nTPM 117.7
Mouse sample Sample description nTPM
Midbrain
nTPM: 117.7
Samples: 4

Max nTPM: 135.2
Min nTPM: 105.7
Sample A Male 135.2
Sample B Male 109.1
Sample C Female 105.7
Sample D Female 120.6

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.3
68632631 Antisense, RP_050125_01_H10, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.