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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:7.9 nTPM
HPA:7.9 nTPM
GTEx:9.0 nTPM
FANTOM5:21.6 Scaled Tags Per Million
Pig:7.5 nTPM
Mouse:17.4 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055678
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.9
Sample id Sample description nTPM
Hippocampus
nTPM: 3.0
2621 Female, age 67, right hemisphere 5.6
2148 Female, age 91, left hemisphere 4.0
1911 Female, age 85, right hemisphere 2.7
2529 Female, age 94, left hemisphere 2.7
1855 Male, age 76, left hemisphere 2.4
1898 Male, age 80, left hemisphere 0.7
Dentate gyrus
nTPM: 4.3
2531 Female, age 67, both hemispheres 9.2
2246 Female, age 85, both hemispheres 4.7
1927 Female, age 91, both hemispheres 4.1
2528 Male, age 74, both hemispheres 3.2
2010 Male, age 76, both hemispheres 2.5
2530 Female, age 94, left hemisphere 2.2
Entorhinal gyrus
nTPM: 7.9
2613 Female, age 94, left hemisphere 16.3
2686 Male, age 75, right hemisphere 12.1
2764 Male, age 80, right hemisphere 9.1
1787 Male, age 76, left hemisphere 5.5
1938 Female, age 85, left hemisphere 4.1
2117 Female, age 91, right hemisphere 0.1
Hippocampus, CA1
nTPM: 3.7
2045 Male, age 76, both hemispheres 5.4
2082 Female, age 91, right hemisphere 4.0
2527 Male, age 74, both hemispheres 3.9
1873 Female, age 85, both hemispheres 2.6
2749 Male, age 80, left hemisphere 2.5
Hippocampus, CA2
nTPM: 3.6
2437 Female, age 94, left hemisphere 6.3
1892 Male, age 76, both hemispheres 4.8
2113 Female, age 91, right hemisphere 3.9
1940 Female, age 85, left hemisphere 3.6
1963 Male, age 80, left hemisphere 1.8
2249 Male, age 74, both hemispheres 1.1
Hippocampus, CA3
nTPM: 5.6
2620 Female, age 94, left hemisphere 12.5
2861 Female, age 67, both hemispheres 11.3
2137 Male, age 80, left hemisphere 3.8
1867 Male, age 76, both hemispheres 3.1
1891 Female, age 85, both hemispheres 2.1
2436 Male, age 74, both hemispheres 1.0
Parahippocampal cortex
nTPM: 7.4
2622 Female, age 67, right hemisphere 15.2
2693 Female, age 94, both hemispheres 14.0
2245 Female, age 91, both hemispheres 8.4
2692 Male, age 74, both hemispheres 7.1
2532 Female, age 72, left hemisphere 6.1
2250 Female, age 67, right hemisphere 6.0
1933 Female, age 85, both hemispheres 4.7
1990 Female, age 91, right hemisphere 4.6
2018 Male, age 76, both hemispheres 4.0
1850 Male, age 80, both hemispheres 3.7
Perirhinal gyrus
nTPM: 7.0
2521 Female, age 94, right hemisphere 9.1
2848 Male, age 76, right hemisphere 9.0
1847 Female, age 91, left hemisphere 7.3
1794 Male, age 80, right hemisphere 5.1
1841 Female, age 85, right hemisphere 4.5
Subiculum
nTPM: 3.4
2438 Female, age 94, left hemisphere 5.8
2619 Male, age 74, both hemispheres 4.3
1977 Female, age 85, both hemispheres 3.4
1901 Male, age 80, both hemispheres 2.7
2729 Female, age 91, right hemisphere 2.7
2042 Male, age 76, both hemispheres 1.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.0
Samples: 197

Max nTPM: 25.6
Min nTPM: 0.6
Std nTPM: 4.9
Median nTPM: 8.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 25.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 24.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 24.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 24.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 22.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 21.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 20.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 20.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 17.6
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 17.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 16.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.6
FF:10153-102I9 76 years, female 23.4
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.5
Samples: 4

Max nTPM: 8.0
Min nTPM: 4.8
Sample A Female 6.1
Sample B Female 7.2
Sample C Male 4.8
Sample D Male 8.0
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.6
Sample A Female 7.7
Sample B Female 6.6
Sample C Male 7.4
Sample D Male 8.5
Subiculum
nTPM: 6.8
Samples: 4

Max nTPM: 8.2
Min nTPM: 5.4
Sample A Female 8.2
Sample B Female 6.3
Sample C Male 7.2
Sample D Male 5.4
Ventral hippocampus
nTPM: 6.8
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.8
Sample A Female 6.4
Sample B Female 7.5
Sample C Male 7.4
Sample D Male 5.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.4
Samples: 4

Max nTPM: 18.8
Min nTPM: 16.2
Sample A Male 16.2
Sample B Male 18.0
Sample C Female 18.8
Sample D Female 16.7
Hippocampal formation
nTPM: 15.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.5
Sample A Male 17.1
Sample B Male 14.1
Sample C Female 13.5
Sample D Female 15.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
70717372 Antisense, RP_050419_01_E04, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

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