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MRPL4
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:36.4 nTPM
HPA:36.4 nTPM
GTEx:43.6 nTPM
FANTOM5:72.0 Scaled Tags Per Million
Pig:26.7 nTPM
Mouse:45.0 nTPM
Allen mouse:3.9 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA051261
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 36.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 35.2
2290 Female, age 72, unknown 37.2
1781 Male, age 74, unknown 36.0
2846 Female, age 79, unknown 35.8
1854 Male, age 80, left hemisphere 35.6
2288 Male, age 75, left hemisphere 35.0
2481 Female, age 94, left hemisphere 34.6
1857 Female, age 85, left hemisphere 33.8
2289 Male, age 61, right hemisphere 33.7
Claustrum
nTPM: 36.4
2198 Male, age 80, both hemispheres 39.2
2645 Female, age 72, unknown 38.5
2568 Male, age 61, both hemispheres 38.0
1956 Male, age 74, unknown 37.0
2491 Male, age 75, both hemispheres 36.7
2196 Female, age 79, unknown 36.6
2284 Female, age 91, both hemispheres 36.5
2292 Female, age 85, both hemispheres 34.2
2392 Female, age 94, both hemispheres 30.9
Globus pallidus, externus
nTPM: 32.9
2646 Male, age 61, right hemisphere 36.4
1996 Male, age 80, right hemisphere 35.1
2772 Female, age 79, unknown 35.1
2395 Male, age 75, both hemispheres 29.0
2567 Female, age 72, unknown 28.6
Globus pallidus, internus
nTPM: 33.1
2483 Female, age 94, right hemisphere 34.9
2287 Male, age 75, right hemisphere 34.6
2778 Female, age 91, both hemispheres 34.2
1818 Male, age 74, unknown 33.7
2037 Male, age 80, right hemisphere 32.3
2566 Female, age 72, unknown 31.3
2111 Female, age 85, right hemisphere 30.5
Nucleus accumbens
nTPM: 34.1
1856 Female, age 91, right hemisphere 37.1
1783 Male, age 74, unknown 35.7
2698 Female, age 72, unknown 35.5
2286 Male, age 75, left hemisphere 35.4
1806 Female, age 85, left hemisphere 35.1
2824 Male, age 61, right hemisphere 33.2
2732 Male, age 80, right hemisphere 31.4
2391 Female, age 94, left hemisphere 29.4
Nucleus basalis of Meynert
nTPM: 34.1
2569 Male, age 61, both hemispheres 35.3
2484 Female, age 94, left hemisphere 34.9
2821 Male, age 75, both hemispheres 34.5
2393 Male, age 80, right hemisphere 31.8
Nucleus of the diagonal band
nTPM: 35.5
2775 Male, age 80, right hemisphere 37.2
2195 Female, age 85, both hemispheres 37.0
2029 Male, age 61, right hemisphere 34.9
1812 Female, age 91, both hemispheres 34.2
1979 Male, age 74, unknown 34.2
Olfactory tubercle
nTPM: 35.7
1998 Female, age 91, both hemispheres 37.6
2856 Male, age 75, right hemisphere 37.0
1846 Male, age 80, right hemisphere 34.7
2487 Female, age 94, left hemisphere 33.5
Putamen
nTPM: 34.2
1838 Male, age 80, right hemisphere 35.8
2466 Female, age 79, unknown 35.4
2647 Male, age 75, left hemisphere 34.9
1937 Female, age 91, right hemisphere 34.2
2482 Female, age 94, left hemisphere 34.0
1829 Male, age 74, unknown 32.9
2489 Female, age 72, unknown 32.0
Septal nuclei
nTPM: 34.1
1960 Male, age 74, unknown 38.5
2031 Female, age 72, unknown 37.7
2059 Female, age 85, both hemispheres 35.2
2629 Female, age 94, right hemisphere 33.5
2009 Female, age 91, both hemispheres 32.4
2199 Male, age 80, right hemisphere 31.1
2394 Male, age 61, left hemisphere 30.2

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 43.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 39.3
Samples: 246

Max nTPM: 67.6
Min nTPM: 20.9
Std nTPM: 7.9
Median nTPM: 39.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 67.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 63.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 63.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 61.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 59.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 58.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 54.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 54.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 54.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 53.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 52.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 43.6
Samples: 246

Max nTPM: 95.2
Min nTPM: 24.4
Std nTPM: 8.5
Median nTPM: 42.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 95.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 72.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 69.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 64.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 64.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 61.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 60.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 59.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 59.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 59.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 58.9
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Brain - Putamen (basal ganglia)
Average nTPM: 42.6
Samples: 205

Max nTPM: 69.7
Min nTPM: 25.4
Std nTPM: 7.8
Median nTPM: 41.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 69.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 63.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 63.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 62.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 61.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 59.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 58.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 56.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 56.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 56.6
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 53.8
FF:10164-103B2 76 years, female 53.8
Globus pallidus
Scaled Tags Per Million: 48.2
FF:10175-103C4 60 years, female 53.6
FF:10161-103A8 76 years, female 42.8
Nucleus accumbens
Scaled Tags Per Million: 72.0
FF:10037-101F1 23-56 years, mixed 72.0
Putamen
Scaled Tags Per Million: 68.5
FF:10176-103C5 60 years, female 68.5

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 26.7
Pig sample Sample description nTPM
Caudate
nTPM: 26.3
Samples: 4

Max nTPM: 30.8
Min nTPM: 22.2
Sample A Female 22.2
Sample B Female 28.7
Sample C Male 30.8
Sample D Male 23.6
Putamen
nTPM: 26.7
Samples: 4

Max nTPM: 35.6
Min nTPM: 19.6
Sample A Female 19.6
Sample B Female 22.4
Sample C Male 35.6
Sample D Male 29.0
Septum
nTPM: 23.1
Samples: 4

Max nTPM: 24.2
Min nTPM: 20.4
Sample A Female 23.7
Sample B Female 24.2
Sample C Male 20.4
Sample D Male 24.1
Ventral pallidum
nTPM: 22.3
Samples: 4

Max nTPM: 26.9
Min nTPM: 19.5
Sample A Female 19.5
Sample B Female 26.9
Sample C Male 21.5
Sample D Male 21.3

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 45.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 41.9
Samples: 4

Max nTPM: 45.6
Min nTPM: 39.5
Sample A Male 41.0
Sample B Male 45.6
Sample C Female 41.6
Sample D Female 39.5
Septum
nTPM: 40.9
Samples: 4

Max nTPM: 44.6
Min nTPM: 39.2
Sample A Male 39.2
Sample B Male 44.6
Sample C Female 39.8
Sample D Female 40.0
Ventral forebrain
nTPM: 45.0
Samples: 4

Max nTPM: 51.1
Min nTPM: 38.5
Sample A Male 45.3
Sample B Male 38.5
Sample C Female 51.1
Sample D Female 45.2

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.8
68845765 Antisense, RP_050224_02_E02, Mouse strain C57BL/6J (56 days, male) 3.8
Pallidum
Expression energy: 3.9
68845765 Antisense, RP_050224_02_E02, Mouse strain C57BL/6J (56 days, male) 3.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.