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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:40.2 nTPM
HPA:40.2 nTPM
GTEx:64.5 nTPM
FANTOM5:27.3 Scaled Tags Per Million
Pig:12.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043520
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.4
1911 Female, age 85, right hemisphere 34.3
1898 Male, age 80, left hemisphere 29.3
2529 Female, age 94, left hemisphere 29.2
2621 Female, age 67, right hemisphere 26.8
2148 Female, age 91, left hemisphere 22.8
1855 Male, age 76, left hemisphere 22.2
Dentate gyrus
nTPM: 34.1
2010 Male, age 76, both hemispheres 54.4
2530 Female, age 94, left hemisphere 37.4
2528 Male, age 74, both hemispheres 33.7
2246 Female, age 85, both hemispheres 33.4
2531 Female, age 67, both hemispheres 24.6
1927 Female, age 91, both hemispheres 21.0
Entorhinal gyrus
nTPM: 21.1
2117 Female, age 91, right hemisphere 27.9
1787 Male, age 76, left hemisphere 21.8
2764 Male, age 80, right hemisphere 20.8
1938 Female, age 85, left hemisphere 19.5
2686 Male, age 75, right hemisphere 18.6
2613 Female, age 94, left hemisphere 18.2
Hippocampus, CA1
nTPM: 30.0
2082 Female, age 91, right hemisphere 58.9
1873 Female, age 85, both hemispheres 31.4
2527 Male, age 74, both hemispheres 21.4
2045 Male, age 76, both hemispheres 20.6
2749 Male, age 80, left hemisphere 17.4
Hippocampus, CA2
nTPM: 40.2
2249 Male, age 74, both hemispheres 71.1
1940 Female, age 85, left hemisphere 64.9
2113 Female, age 91, right hemisphere 35.6
2437 Female, age 94, left hemisphere 26.1
1963 Male, age 80, left hemisphere 22.7
1892 Male, age 76, both hemispheres 20.5
Hippocampus, CA3
nTPM: 23.1
2436 Male, age 74, both hemispheres 27.8
1867 Male, age 76, both hemispheres 24.7
2620 Female, age 94, left hemisphere 24.5
1891 Female, age 85, both hemispheres 23.3
2137 Male, age 80, left hemisphere 19.9
2861 Female, age 67, both hemispheres 18.6
Parahippocampal cortex
nTPM: 19.9
2018 Male, age 76, both hemispheres 25.4
2245 Female, age 91, both hemispheres 22.0
1990 Female, age 91, right hemisphere 20.1
1933 Female, age 85, both hemispheres 19.8
2250 Female, age 67, right hemisphere 19.5
2532 Female, age 72, left hemisphere 19.3
2692 Male, age 74, both hemispheres 19.0
2622 Female, age 67, right hemisphere 18.3
1850 Male, age 80, both hemispheres 17.8
2693 Female, age 94, both hemispheres 17.4
Perirhinal gyrus
nTPM: 18.2
2521 Female, age 94, right hemisphere 19.8
1841 Female, age 85, right hemisphere 18.8
1794 Male, age 80, right hemisphere 17.9
2848 Male, age 76, right hemisphere 17.5
1847 Female, age 91, left hemisphere 17.3
Subiculum
nTPM: 24.6
2042 Male, age 76, both hemispheres 36.2
2729 Female, age 91, right hemisphere 27.6
1901 Male, age 80, both hemispheres 24.3
1977 Female, age 85, both hemispheres 20.6
2619 Male, age 74, both hemispheres 20.5
2438 Female, age 94, left hemisphere 18.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.5
Samples: 197

Max nTPM: 573.0
Min nTPM: 5.4
Std nTPM: 87.2
Median nTPM: 30.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 573.0
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 517.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 405.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 371.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 332.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 322.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 313.5
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 286.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 284.0
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 281.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 214.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.3
FF:10153-102I9 76 years, female 34.8
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 20.0
Min nTPM: 4.4
Sample A Female 20.0
Sample B Female 8.4
Sample C Male 11.4
Sample D Male 4.4
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.0
Sample A Female 5.4
Sample B Female 5.7
Sample C Male 7.1
Sample D Male 4.0
Subiculum
nTPM: 7.9
Samples: 4

Max nTPM: 8.3
Min nTPM: 7.2
Sample A Female 8.3
Sample B Female 8.0
Sample C Male 7.2
Sample D Male 7.9
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 18.3
Min nTPM: 8.0
Sample A Female 18.3
Sample B Female 8.0
Sample C Male 13.6
Sample D Male 9.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.