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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:12.5 nTPM
HPA:12.5 nTPM
GTEx:10.1 nTPM
FANTOM5:11.9 Scaled Tags Per Million
Pig:7.8 nTPM
Mouse:5.0 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007270
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.9
2529 Female, age 94, left hemisphere 13.9
1911 Female, age 85, right hemisphere 12.1
2621 Female, age 67, right hemisphere 12.1
1855 Male, age 76, left hemisphere 11.4
2148 Female, age 91, left hemisphere 11.4
1898 Male, age 80, left hemisphere 10.6
Dentate gyrus
nTPM: 11.8
2530 Female, age 94, left hemisphere 16.8
2531 Female, age 67, both hemispheres 13.4
1927 Female, age 91, both hemispheres 10.6
2528 Male, age 74, both hemispheres 10.3
2246 Female, age 85, both hemispheres 10.2
2010 Male, age 76, both hemispheres 9.4
Entorhinal gyrus
nTPM: 10.7
2686 Male, age 75, right hemisphere 12.4
2117 Female, age 91, right hemisphere 11.9
2764 Male, age 80, right hemisphere 11.4
2613 Female, age 94, left hemisphere 10.7
1787 Male, age 76, left hemisphere 9.3
1938 Female, age 85, left hemisphere 8.3
Hippocampus, CA1
nTPM: 9.8
2527 Male, age 74, both hemispheres 11.7
2082 Female, age 91, right hemisphere 10.7
1873 Female, age 85, both hemispheres 10.0
2045 Male, age 76, both hemispheres 9.4
2749 Male, age 80, left hemisphere 7.3
Hippocampus, CA2
nTPM: 11.7
2437 Female, age 94, left hemisphere 14.8
2249 Male, age 74, both hemispheres 12.0
2113 Female, age 91, right hemisphere 11.8
1963 Male, age 80, left hemisphere 11.4
1940 Female, age 85, left hemisphere 10.5
1892 Male, age 76, both hemispheres 10.0
Hippocampus, CA3
nTPM: 12.5
2861 Female, age 67, both hemispheres 17.7
1891 Female, age 85, both hemispheres 12.3
2436 Male, age 74, both hemispheres 12.0
2620 Female, age 94, left hemisphere 11.7
1867 Male, age 76, both hemispheres 11.0
2137 Male, age 80, left hemisphere 10.1
Parahippocampal cortex
nTPM: 10.5
2692 Male, age 74, both hemispheres 13.7
2622 Female, age 67, right hemisphere 12.5
2532 Female, age 72, left hemisphere 11.7
2018 Male, age 76, both hemispheres 10.5
1933 Female, age 85, both hemispheres 9.8
1990 Female, age 91, right hemisphere 9.8
2693 Female, age 94, both hemispheres 9.6
1850 Male, age 80, both hemispheres 9.5
2245 Female, age 91, both hemispheres 9.5
2250 Female, age 67, right hemisphere 8.9
Perirhinal gyrus
nTPM: 9.7
2521 Female, age 94, right hemisphere 10.4
1794 Male, age 80, right hemisphere 10.1
1841 Female, age 85, right hemisphere 9.7
1847 Female, age 91, left hemisphere 9.2
2848 Male, age 76, right hemisphere 9.1
Subiculum
nTPM: 11.3
2729 Female, age 91, right hemisphere 12.7
2619 Male, age 74, both hemispheres 12.1
2042 Male, age 76, both hemispheres 11.4
2438 Female, age 94, left hemisphere 11.2
1901 Male, age 80, both hemispheres 10.1
1977 Female, age 85, both hemispheres 10.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 30.4
Min nTPM: 1.6
Std nTPM: 5.4
Median nTPM: 9.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 30.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 28.7
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 28.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 27.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 27.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 27.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 25.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 20.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 20.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 19.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 18.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.9
FF:10153-102I9 76 years, female 14.5
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 7.5
Min nTPM: 6.5
Sample A Female 6.9
Sample B Female 6.5
Sample C Male 7.5
Sample D Male 6.6
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 8.3
Min nTPM: 7.0
Sample A Female 8.2
Sample B Female 8.3
Sample C Male 7.9
Sample D Male 7.0
Subiculum
nTPM: 7.7
Samples: 4

Max nTPM: 8.4
Min nTPM: 7.1
Sample A Female 8.4
Sample B Female 7.6
Sample C Male 7.1
Sample D Male 7.6
Ventral hippocampus
nTPM: 7.8
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.0
Sample A Female 7.2
Sample B Female 7.0
Sample C Male 9.7
Sample D Male 7.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.8
Sample A Male 5.0
Sample B Male 3.8
Sample C Female 5.9
Sample D Female 5.4
Hippocampal formation
nTPM: 4.7
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.0
Sample A Male 4.1
Sample B Male 4.5
Sample C Female 4.0
Sample D Female 6.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
513247 Antisense, RP_040810_01_E03, Mouse strain C57BL/6J (56 days, male) 1.0

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