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SSBP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:71.5 nTPM
HPA:71.5 nTPM
GTEx:76.3 nTPM
FANTOM5:113.9 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:24.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002866
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.5
Sample id Sample description nTPM
Hippocampus
nTPM: 71.5
1898 Male, age 80, left hemisphere 73.7
1855 Male, age 76, left hemisphere 72.4
1911 Female, age 85, right hemisphere 71.4
2529 Female, age 94, left hemisphere 71.4
2148 Female, age 91, left hemisphere 70.9
2621 Female, age 67, right hemisphere 69.0
Dentate gyrus
nTPM: 70.0
2010 Male, age 76, both hemispheres 74.4
1927 Female, age 91, both hemispheres 71.3
2530 Female, age 94, left hemisphere 70.1
2246 Female, age 85, both hemispheres 69.1
2531 Female, age 67, both hemispheres 68.8
2528 Male, age 74, both hemispheres 66.2
Entorhinal gyrus
nTPM: 69.5
1938 Female, age 85, left hemisphere 71.2
1787 Male, age 76, left hemisphere 71.0
2686 Male, age 75, right hemisphere 70.5
2117 Female, age 91, right hemisphere 70.2
2764 Male, age 80, right hemisphere 67.3
2613 Female, age 94, left hemisphere 66.8
Hippocampus, CA1
nTPM: 69.3
1873 Female, age 85, both hemispheres 71.0
2045 Male, age 76, both hemispheres 70.3
2527 Male, age 74, both hemispheres 69.6
2749 Male, age 80, left hemisphere 69.6
2082 Female, age 91, right hemisphere 66.1
Hippocampus, CA2
nTPM: 70.4
1892 Male, age 76, both hemispheres 81.1
1940 Female, age 85, left hemisphere 69.6
2437 Female, age 94, left hemisphere 69.3
2249 Male, age 74, both hemispheres 68.2
1963 Male, age 80, left hemisphere 67.9
2113 Female, age 91, right hemisphere 66.2
Hippocampus, CA3
nTPM: 70.1
1867 Male, age 76, both hemispheres 75.7
1891 Female, age 85, both hemispheres 71.6
2137 Male, age 80, left hemisphere 70.9
2436 Male, age 74, both hemispheres 69.1
2861 Female, age 67, both hemispheres 67.3
2620 Female, age 94, left hemisphere 65.6
Parahippocampal cortex
nTPM: 69.8
1850 Male, age 80, both hemispheres 74.0
2250 Female, age 67, right hemisphere 71.7
2532 Female, age 72, left hemisphere 71.1
2693 Female, age 94, both hemispheres 70.4
1933 Female, age 85, both hemispheres 70.2
2245 Female, age 91, both hemispheres 70.0
2692 Male, age 74, both hemispheres 68.7
1990 Female, age 91, right hemisphere 68.1
2622 Female, age 67, right hemisphere 67.4
2018 Male, age 76, both hemispheres 66.4
Perirhinal gyrus
nTPM: 69.8
1841 Female, age 85, right hemisphere 72.2
1847 Female, age 91, left hemisphere 70.9
1794 Male, age 80, right hemisphere 70.7
2521 Female, age 94, right hemisphere 68.4
2848 Male, age 76, right hemisphere 66.9
Subiculum
nTPM: 70.7
1901 Male, age 80, both hemispheres 72.2
1977 Female, age 85, both hemispheres 72.2
2438 Female, age 94, left hemisphere 72.0
2619 Male, age 74, both hemispheres 70.7
2042 Male, age 76, both hemispheres 69.4
2729 Female, age 91, right hemisphere 67.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.3
Samples: 197

Max nTPM: 183.7
Min nTPM: 46.0
Std nTPM: 16.7
Median nTPM: 74.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 183.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 130.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 125.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 116.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 115.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 114.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 107.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 106.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 105.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 104.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 103.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.9
FF:10169-103B7 60 years, female 134.9
FF:10153-102I9 76 years, female 92.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 16.7
Min nTPM: 10.8
Sample A Female 16.7
Sample B Female 11.1
Sample C Male 14.1
Sample D Male 10.8
Entorhinal cortex
nTPM: 11.5
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.7
Sample A Female 11.2
Sample B Female 13.6
Sample C Male 11.5
Sample D Male 9.7
Subiculum
nTPM: 12.2
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.9
Sample A Female 14.4
Sample B Female 12.2
Sample C Male 10.9
Sample D Male 11.3
Ventral hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 13.5
Min nTPM: 11.3
Sample A Female 13.5
Sample B Female 11.3
Sample C Male 11.4
Sample D Male 11.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 24.3
Min nTPM: 18.0
Sample A Male 23.8
Sample B Male 21.9
Sample C Female 24.3
Sample D Female 18.0
Hippocampal formation
nTPM: 24.9
Samples: 4

Max nTPM: 29.7
Min nTPM: 22.4
Sample A Male 29.7
Sample B Male 24.9
Sample C Female 22.4
Sample D Female 22.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68522423 Antisense, RP_050118_02_A06, Mouse strain C57BL/6J (56 days, male) 0.7
77910779 Antisense, RP_070208_04_G04, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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