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CHCHD2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:325.3 nTPM
HPA:325.3 nTPM
GTEx:295.8 nTPM
FANTOM5:133.4 Scaled Tags Per Million
Pig:101.7 nTPM
Mouse:325.6 nTPM
Allen mouse:23.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027407Antibody HPA052510
Glial cells Not detectedLow
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 325.3
Sample id Sample description nTPM
Hippocampus
nTPM: 310.7
1898 Male, age 80, left hemisphere 337.9
2529 Female, age 94, left hemisphere 317.1
1911 Female, age 85, right hemisphere 305.6
2621 Female, age 67, right hemisphere 304.0
2148 Female, age 91, left hemisphere 301.9
1855 Male, age 76, left hemisphere 298.1
Dentate gyrus
nTPM: 309.8
2528 Male, age 74, both hemispheres 324.1
2010 Male, age 76, both hemispheres 323.6
1927 Female, age 91, both hemispheres 323.0
2530 Female, age 94, left hemisphere 308.0
2246 Female, age 85, both hemispheres 302.3
2531 Female, age 67, both hemispheres 278.1
Entorhinal gyrus
nTPM: 307.4
2764 Male, age 80, right hemisphere 322.3
1938 Female, age 85, left hemisphere 319.3
2117 Female, age 91, right hemisphere 319.2
1787 Male, age 76, left hemisphere 312.5
2613 Female, age 94, left hemisphere 288.2
2686 Male, age 75, right hemisphere 282.5
Hippocampus, CA1
nTPM: 325.3
2749 Male, age 80, left hemisphere 365.2
2527 Male, age 74, both hemispheres 328.1
2082 Female, age 91, right hemisphere 312.4
1873 Female, age 85, both hemispheres 311.9
2045 Male, age 76, both hemispheres 308.7
Hippocampus, CA2
nTPM: 316.1
2249 Male, age 74, both hemispheres 345.1
1963 Male, age 80, left hemisphere 334.8
1892 Male, age 76, both hemispheres 311.4
2113 Female, age 91, right hemisphere 302.8
1940 Female, age 85, left hemisphere 302.0
2437 Female, age 94, left hemisphere 300.6
Hippocampus, CA3
nTPM: 309.0
2436 Male, age 74, both hemispheres 356.4
2137 Male, age 80, left hemisphere 317.7
1867 Male, age 76, both hemispheres 308.0
1891 Female, age 85, both hemispheres 300.7
2620 Female, age 94, left hemisphere 295.4
2861 Female, age 67, both hemispheres 276.0
Parahippocampal cortex
nTPM: 303.1
2250 Female, age 67, right hemisphere 320.0
1933 Female, age 85, both hemispheres 317.2
1990 Female, age 91, right hemisphere 316.0
2018 Male, age 76, both hemispheres 311.6
2245 Female, age 91, both hemispheres 309.9
1850 Male, age 80, both hemispheres 306.9
2532 Female, age 72, left hemisphere 289.7
2692 Male, age 74, both hemispheres 287.0
2622 Female, age 67, right hemisphere 286.8
2693 Female, age 94, both hemispheres 285.7
Perirhinal gyrus
nTPM: 315.2
1847 Female, age 91, left hemisphere 337.2
1794 Male, age 80, right hemisphere 331.2
1841 Female, age 85, right hemisphere 309.8
2521 Female, age 94, right hemisphere 306.9
2848 Male, age 76, right hemisphere 291.2
Subiculum
nTPM: 304.5
1977 Female, age 85, both hemispheres 323.2
2729 Female, age 91, right hemisphere 312.9
2619 Male, age 74, both hemispheres 309.6
1901 Male, age 80, both hemispheres 307.0
2042 Male, age 76, both hemispheres 299.4
2438 Female, age 94, left hemisphere 275.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 295.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 295.8
Samples: 197

Max nTPM: 907.9
Min nTPM: 144.2
Std nTPM: 86.6
Median nTPM: 280.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 907.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 594.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 581.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 526.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 477.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 460.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 456.0
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 454.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 450.9
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 449.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 439.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 133.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.4
FF:10169-103B7 60 years, female 187.2
FF:10153-102I9 76 years, female 79.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 101.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 101.7
Samples: 4

Max nTPM: 129.0
Min nTPM: 76.2
Sample A Female 129.0
Sample B Female 99.9
Sample C Male 101.6
Sample D Male 76.2
Entorhinal cortex
nTPM: 84.6
Samples: 4

Max nTPM: 108.9
Min nTPM: 63.6
Sample A Female 71.2
Sample B Female 108.9
Sample C Male 94.5
Sample D Male 63.6
Subiculum
nTPM: 82.7
Samples: 4

Max nTPM: 103.1
Min nTPM: 73.9
Sample A Female 103.1
Sample B Female 78.4
Sample C Male 73.9
Sample D Male 75.5
Ventral hippocampus
nTPM: 92.0
Samples: 4

Max nTPM: 103.1
Min nTPM: 76.8
Sample A Female 97.9
Sample B Female 76.8
Sample C Male 103.1
Sample D Male 90.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 325.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 311.0
Samples: 4

Max nTPM: 333.3
Min nTPM: 296.8
Sample A Male 296.8
Sample B Male 333.3
Sample C Female 312.7
Sample D Female 301.0
Hippocampal formation
nTPM: 325.6
Samples: 4

Max nTPM: 343.8
Min nTPM: 313.9
Sample A Male 329.4
Sample B Male 315.2
Sample C Female 313.9
Sample D Female 343.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.2
69262287 Antisense, RP_050303_01_F04, Mouse strain C57BL/6J (56 days, male) 24.8
74272036 Antisense, RP_060202_01_A03, Mouse strain C57BL/6J (56 days, male) 21.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.