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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:43.0 nTPM
HPA:43.0 nTPM
GTEx:35.2 nTPM
FANTOM5:107.1 Scaled Tags Per Million
Pig:92.2 nTPM
Mouse:74.6 nTPM
Allen mouse:7.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005750Antibody CAB005399
Glial cells HighMedium
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.0
Sample id Sample description nTPM
Hippocampus
nTPM: 26.4
2621 Female, age 67, right hemisphere 36.4
1911 Female, age 85, right hemisphere 31.3
1898 Male, age 80, left hemisphere 27.7
1855 Male, age 76, left hemisphere 24.9
2529 Female, age 94, left hemisphere 19.1
2148 Female, age 91, left hemisphere 18.7
Dentate gyrus
nTPM: 26.3
1927 Female, age 91, both hemispheres 37.7
2010 Male, age 76, both hemispheres 31.9
2530 Female, age 94, left hemisphere 31.4
2246 Female, age 85, both hemispheres 22.2
2528 Male, age 74, both hemispheres 17.6
2531 Female, age 67, both hemispheres 17.3
Entorhinal gyrus
nTPM: 18.9
1938 Female, age 85, left hemisphere 23.8
2613 Female, age 94, left hemisphere 23.2
1787 Male, age 76, left hemisphere 18.5
2764 Male, age 80, right hemisphere 17.1
2686 Male, age 75, right hemisphere 15.9
2117 Female, age 91, right hemisphere 14.7
Hippocampus, CA1
nTPM: 43.0
2749 Male, age 80, left hemisphere 111.5
1873 Female, age 85, both hemispheres 32.4
2527 Male, age 74, both hemispheres 30.7
2045 Male, age 76, both hemispheres 24.9
2082 Female, age 91, right hemisphere 15.4
Hippocampus, CA2
nTPM: 25.4
1963 Male, age 80, left hemisphere 40.2
1892 Male, age 76, both hemispheres 32.2
2249 Male, age 74, both hemispheres 28.1
1940 Female, age 85, left hemisphere 17.7
2437 Female, age 94, left hemisphere 17.5
2113 Female, age 91, right hemisphere 16.7
Hippocampus, CA3
nTPM: 34.2
2137 Male, age 80, left hemisphere 89.3
1867 Male, age 76, both hemispheres 26.8
2436 Male, age 74, both hemispheres 25.3
2620 Female, age 94, left hemisphere 24.3
2861 Female, age 67, both hemispheres 20.7
1891 Female, age 85, both hemispheres 18.6
Parahippocampal cortex
nTPM: 20.6
2245 Female, age 91, both hemispheres 33.4
2250 Female, age 67, right hemisphere 23.5
1850 Male, age 80, both hemispheres 22.6
1990 Female, age 91, right hemisphere 20.2
1933 Female, age 85, both hemispheres 19.9
2693 Female, age 94, both hemispheres 19.4
2532 Female, age 72, left hemisphere 18.5
2622 Female, age 67, right hemisphere 18.5
2692 Male, age 74, both hemispheres 16.2
2018 Male, age 76, both hemispheres 14.1
Perirhinal gyrus
nTPM: 22.4
1847 Female, age 91, left hemisphere 24.9
1841 Female, age 85, right hemisphere 24.2
1794 Male, age 80, right hemisphere 21.7
2521 Female, age 94, right hemisphere 21.4
2848 Male, age 76, right hemisphere 19.9
Subiculum
nTPM: 22.3
1901 Male, age 80, both hemispheres 39.9
2042 Male, age 76, both hemispheres 28.7
2438 Female, age 94, left hemisphere 19.1
1977 Female, age 85, both hemispheres 18.8
2619 Male, age 74, both hemispheres 15.8
2729 Female, age 91, right hemisphere 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.2
Samples: 197

Max nTPM: 137.1
Min nTPM: 12.4
Std nTPM: 19.2
Median nTPM: 29.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 137.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 105.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 100.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 95.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 89.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 78.5
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 77.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 77.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 75.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 73.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 72.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 107.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 107.1
FF:10169-103B7 60 years, female 131.8
FF:10153-102I9 76 years, female 82.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 92.2
Samples: 4

Max nTPM: 118.7
Min nTPM: 76.2
Sample A Female 118.7
Sample B Female 95.8
Sample C Male 78.0
Sample D Male 76.2
Entorhinal cortex
nTPM: 51.4
Samples: 4

Max nTPM: 57.5
Min nTPM: 45.0
Sample A Female 52.4
Sample B Female 57.5
Sample C Male 45.0
Sample D Male 50.7
Subiculum
nTPM: 44.8
Samples: 4

Max nTPM: 52.1
Min nTPM: 37.6
Sample A Female 52.1
Sample B Female 37.6
Sample C Male 48.2
Sample D Male 41.2
Ventral hippocampus
nTPM: 70.7
Samples: 4

Max nTPM: 133.1
Min nTPM: 39.6
Sample A Female 57.5
Sample B Female 39.6
Sample C Male 52.6
Sample D Male 133.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.0
Samples: 4

Max nTPM: 72.9
Min nTPM: 58.0
Sample A Male 58.0
Sample B Male 58.6
Sample C Female 58.4
Sample D Female 72.9
Hippocampal formation
nTPM: 74.6
Samples: 4

Max nTPM: 90.4
Min nTPM: 61.3
Sample A Male 65.2
Sample B Male 81.3
Sample C Female 90.4
Sample D Female 61.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.1
69013615 Antisense, RP_050309_02_F08, Mouse strain C57BL/6J (56 days, male) 7.1

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The Human Protein Atlas

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