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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:85.2 nTPM
HPA:85.2 nTPM
GTEx:65.7 nTPM
FANTOM5:59.4 Scaled Tags Per Million
Pig:103.1 nTPM
Mouse:416.6 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060945
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.2
Sample id Sample description nTPM
Hippocampus
nTPM: 62.1
1898 Male, age 80, left hemisphere 76.5
1855 Male, age 76, left hemisphere 75.6
2621 Female, age 67, right hemisphere 59.7
2148 Female, age 91, left hemisphere 54.8
2529 Female, age 94, left hemisphere 53.9
1911 Female, age 85, right hemisphere 52.1
Dentate gyrus
nTPM: 61.9
2010 Male, age 76, both hemispheres 67.1
1927 Female, age 91, both hemispheres 66.6
2246 Female, age 85, both hemispheres 63.1
2530 Female, age 94, left hemisphere 60.3
2531 Female, age 67, both hemispheres 60.0
2528 Male, age 74, both hemispheres 54.2
Entorhinal gyrus
nTPM: 63.0
2764 Male, age 80, right hemisphere 71.6
2613 Female, age 94, left hemisphere 67.7
1787 Male, age 76, left hemisphere 63.8
1938 Female, age 85, left hemisphere 62.9
2686 Male, age 75, right hemisphere 62.2
2117 Female, age 91, right hemisphere 49.9
Hippocampus, CA1
nTPM: 70.0
2749 Male, age 80, left hemisphere 91.9
2045 Male, age 76, both hemispheres 74.1
1873 Female, age 85, both hemispheres 65.1
2082 Female, age 91, right hemisphere 60.9
2527 Male, age 74, both hemispheres 58.2
Hippocampus, CA2
nTPM: 62.1
1892 Male, age 76, both hemispheres 77.8
1940 Female, age 85, left hemisphere 65.0
1963 Male, age 80, left hemisphere 63.8
2437 Female, age 94, left hemisphere 56.4
2113 Female, age 91, right hemisphere 55.8
2249 Male, age 74, both hemispheres 54.0
Hippocampus, CA3
nTPM: 65.6
2137 Male, age 80, left hemisphere 85.4
1867 Male, age 76, both hemispheres 72.6
2620 Female, age 94, left hemisphere 66.6
2861 Female, age 67, both hemispheres 62.3
1891 Female, age 85, both hemispheres 55.5
2436 Male, age 74, both hemispheres 51.1
Parahippocampal cortex
nTPM: 65.2
1850 Male, age 80, both hemispheres 78.9
2018 Male, age 76, both hemispheres 74.1
1933 Female, age 85, both hemispheres 70.3
2245 Female, age 91, both hemispheres 69.4
2693 Female, age 94, both hemispheres 66.7
2250 Female, age 67, right hemisphere 63.9
2532 Female, age 72, left hemisphere 61.1
2622 Female, age 67, right hemisphere 59.5
1990 Female, age 91, right hemisphere 56.0
2692 Male, age 74, both hemispheres 51.8
Perirhinal gyrus
nTPM: 85.2
1794 Male, age 80, right hemisphere 92.9
2521 Female, age 94, right hemisphere 91.1
1847 Female, age 91, left hemisphere 89.9
1841 Female, age 85, right hemisphere 81.4
2848 Male, age 76, right hemisphere 70.6
Subiculum
nTPM: 59.8
1901 Male, age 80, both hemispheres 70.9
1977 Female, age 85, both hemispheres 66.6
2042 Male, age 76, both hemispheres 61.1
2619 Male, age 74, both hemispheres 55.3
2438 Female, age 94, left hemisphere 53.9
2729 Female, age 91, right hemisphere 51.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.7
Samples: 197

Max nTPM: 187.2
Min nTPM: 19.4
Std nTPM: 32.9
Median nTPM: 60.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 187.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 179.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 165.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 151.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 149.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 148.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 146.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 145.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 138.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 137.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 135.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.4
FF:10169-103B7 60 years, female 77.4
FF:10153-102I9 76 years, female 41.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 103.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 86.2
Samples: 4

Max nTPM: 116.2
Min nTPM: 58.1
Sample A Female 116.2
Sample B Female 85.1
Sample C Male 85.3
Sample D Male 58.1
Entorhinal cortex
nTPM: 103.0
Samples: 4

Max nTPM: 116.4
Min nTPM: 83.7
Sample A Female 106.5
Sample B Female 105.5
Sample C Male 116.4
Sample D Male 83.7
Subiculum
nTPM: 86.7
Samples: 4

Max nTPM: 118.8
Min nTPM: 74.8
Sample A Female 118.8
Sample B Female 77.3
Sample C Male 74.8
Sample D Male 75.8
Ventral hippocampus
nTPM: 79.4
Samples: 4

Max nTPM: 98.8
Min nTPM: 53.4
Sample A Female 82.5
Sample B Female 53.4
Sample C Male 82.8
Sample D Male 98.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 416.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 416.6
Samples: 4

Max nTPM: 460.5
Min nTPM: 375.1
Sample A Male 375.1
Sample B Male 418.2
Sample C Female 412.4
Sample D Female 460.5
Hippocampal formation
nTPM: 394.5
Samples: 4

Max nTPM: 460.4
Min nTPM: 348.5
Sample A Male 460.4
Sample B Male 396.7
Sample C Female 372.4
Sample D Female 348.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
69526707 Antisense, RP_050421_01_E01, Mouse strain C57BL/6J (56 days, male) 11.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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