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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:45.4 nTPM
HPA:45.4 nTPM
GTEx:44.0 nTPM
FANTOM5:73.5 Scaled Tags Per Million
Pig:84.5 nTPM
Mouse:95.7 nTPM
Allen mouse:12.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000162
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.4
Sample id Sample description nTPM
Hippocampus
nTPM: 32.6
1898 Male, age 80, left hemisphere 41.5
1855 Male, age 76, left hemisphere 34.2
2148 Female, age 91, left hemisphere 31.1
2621 Female, age 67, right hemisphere 30.8
1911 Female, age 85, right hemisphere 30.3
2529 Female, age 94, left hemisphere 27.8
Dentate gyrus
nTPM: 33.1
1927 Female, age 91, both hemispheres 40.2
2010 Male, age 76, both hemispheres 34.9
2246 Female, age 85, both hemispheres 32.7
2528 Male, age 74, both hemispheres 32.6
2531 Female, age 67, both hemispheres 29.1
2530 Female, age 94, left hemisphere 28.9
Entorhinal gyrus
nTPM: 35.4
1938 Female, age 85, left hemisphere 41.8
2764 Male, age 80, right hemisphere 38.1
1787 Male, age 76, left hemisphere 37.6
2613 Female, age 94, left hemisphere 37.1
2686 Male, age 75, right hemisphere 28.9
2117 Female, age 91, right hemisphere 28.8
Hippocampus, CA1
nTPM: 36.4
2749 Male, age 80, left hemisphere 47.0
1873 Female, age 85, both hemispheres 35.8
2045 Male, age 76, both hemispheres 35.3
2082 Female, age 91, right hemisphere 32.6
2527 Male, age 74, both hemispheres 31.2
Hippocampus, CA2
nTPM: 34.6
1892 Male, age 76, both hemispheres 40.7
1963 Male, age 80, left hemisphere 38.0
2249 Male, age 74, both hemispheres 34.3
1940 Female, age 85, left hemisphere 33.9
2113 Female, age 91, right hemisphere 32.0
2437 Female, age 94, left hemisphere 28.8
Hippocampus, CA3
nTPM: 34.6
2137 Male, age 80, left hemisphere 46.8
2620 Female, age 94, left hemisphere 34.3
1867 Male, age 76, both hemispheres 34.0
2436 Male, age 74, both hemispheres 32.8
1891 Female, age 85, both hemispheres 32.0
2861 Female, age 67, both hemispheres 27.7
Parahippocampal cortex
nTPM: 36.0
1850 Male, age 80, both hemispheres 46.1
2693 Female, age 94, both hemispheres 40.2
1933 Female, age 85, both hemispheres 39.9
1990 Female, age 91, right hemisphere 39.6
2245 Female, age 91, both hemispheres 35.7
2250 Female, age 67, right hemisphere 35.4
2532 Female, age 72, left hemisphere 34.7
2018 Male, age 76, both hemispheres 31.3
2692 Male, age 74, both hemispheres 29.2
2622 Female, age 67, right hemisphere 27.8
Perirhinal gyrus
nTPM: 45.4
1847 Female, age 91, left hemisphere 48.6
1841 Female, age 85, right hemisphere 46.5
1794 Male, age 80, right hemisphere 46.2
2848 Male, age 76, right hemisphere 43.0
2521 Female, age 94, right hemisphere 42.6
Subiculum
nTPM: 31.1
1977 Female, age 85, both hemispheres 37.6
1901 Male, age 80, both hemispheres 34.6
2729 Female, age 91, right hemisphere 30.1
2438 Female, age 94, left hemisphere 28.6
2619 Male, age 74, both hemispheres 28.4
2042 Male, age 76, both hemispheres 27.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.0
Samples: 197

Max nTPM: 69.7
Min nTPM: 15.3
Std nTPM: 9.2
Median nTPM: 42.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 69.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 67.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 67.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 66.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 65.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 64.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 64.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 63.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 62.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 62.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.5
FF:10169-103B7 60 years, female 84.7
FF:10153-102I9 76 years, female 62.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 84.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.5
Samples: 4

Max nTPM: 74.9
Min nTPM: 60.6
Sample A Female 74.0
Sample B Female 74.9
Sample C Male 68.6
Sample D Male 60.6
Entorhinal cortex
nTPM: 84.5
Samples: 4

Max nTPM: 98.3
Min nTPM: 72.6
Sample A Female 80.4
Sample B Female 98.3
Sample C Male 86.7
Sample D Male 72.6
Subiculum
nTPM: 75.8
Samples: 4

Max nTPM: 98.3
Min nTPM: 65.2
Sample A Female 98.3
Sample B Female 69.3
Sample C Male 70.5
Sample D Male 65.2
Ventral hippocampus
nTPM: 67.6
Samples: 4

Max nTPM: 73.9
Min nTPM: 61.4
Sample A Female 68.9
Sample B Female 61.4
Sample C Male 73.9
Sample D Male 66.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 95.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.8
Samples: 4

Max nTPM: 108.2
Min nTPM: 88.1
Sample A Male 90.4
Sample B Male 96.3
Sample C Female 88.1
Sample D Female 108.2
Hippocampal formation
nTPM: 87.5
Samples: 4

Max nTPM: 94.6
Min nTPM: 75.6
Sample A Male 93.2
Sample B Male 94.6
Sample C Female 86.5
Sample D Female 75.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.3
70429453 Antisense, RP_050614_01_F11, Mouse strain C57BL/6J (56 days, male) 12.3

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