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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:404.5 nTPM
HPA:404.5 nTPM
GTEx:423.5 nTPM
FANTOM5:444.9 Scaled Tags Per Million
Pig:62.1 nTPM
Mouse:186.7 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035642
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 404.5
Sample id Sample description nTPM
Hippocampus
nTPM: 403.3
2529 Female, age 94, left hemisphere 414.6
2621 Female, age 67, right hemisphere 414.5
1898 Male, age 80, left hemisphere 404.8
1855 Male, age 76, left hemisphere 399.0
2148 Female, age 91, left hemisphere 396.1
1911 Female, age 85, right hemisphere 391.0
Dentate gyrus
nTPM: 397.0
2530 Female, age 94, left hemisphere 412.4
2531 Female, age 67, both hemispheres 402.5
2246 Female, age 85, both hemispheres 402.2
2010 Male, age 76, both hemispheres 398.2
1927 Female, age 91, both hemispheres 388.6
2528 Male, age 74, both hemispheres 378.1
Entorhinal gyrus
nTPM: 397.3
2764 Male, age 80, right hemisphere 404.9
1787 Male, age 76, left hemisphere 404.2
1938 Female, age 85, left hemisphere 399.4
2686 Male, age 75, right hemisphere 395.3
2117 Female, age 91, right hemisphere 392.0
2613 Female, age 94, left hemisphere 388.3
Hippocampus, CA1
nTPM: 402.8
2749 Male, age 80, left hemisphere 423.8
2527 Male, age 74, both hemispheres 407.3
2045 Male, age 76, both hemispheres 400.2
1873 Female, age 85, both hemispheres 400.0
2082 Female, age 91, right hemisphere 382.8
Hippocampus, CA2
nTPM: 393.1
1892 Male, age 76, both hemispheres 402.1
1963 Male, age 80, left hemisphere 397.4
2437 Female, age 94, left hemisphere 396.5
1940 Female, age 85, left hemisphere 389.8
2113 Female, age 91, right hemisphere 387.7
2249 Male, age 74, both hemispheres 385.3
Hippocampus, CA3
nTPM: 397.3
2137 Male, age 80, left hemisphere 404.7
2861 Female, age 67, both hemispheres 401.0
1867 Male, age 76, both hemispheres 396.1
2620 Female, age 94, left hemisphere 394.9
2436 Male, age 74, both hemispheres 393.6
1891 Female, age 85, both hemispheres 393.4
Parahippocampal cortex
nTPM: 399.7
2245 Female, age 91, both hemispheres 424.5
2532 Female, age 72, left hemisphere 409.6
1850 Male, age 80, both hemispheres 405.6
1933 Female, age 85, both hemispheres 397.2
2692 Male, age 74, both hemispheres 396.9
2250 Female, age 67, right hemisphere 396.1
2622 Female, age 67, right hemisphere 395.6
2018 Male, age 76, both hemispheres 395.3
1990 Female, age 91, right hemisphere 394.7
2693 Female, age 94, both hemispheres 381.3
Perirhinal gyrus
nTPM: 404.5
1794 Male, age 80, right hemisphere 414.9
1847 Female, age 91, left hemisphere 408.6
1841 Female, age 85, right hemisphere 405.7
2848 Male, age 76, right hemisphere 399.1
2521 Female, age 94, right hemisphere 394.0
Subiculum
nTPM: 398.9
1901 Male, age 80, both hemispheres 409.9
2438 Female, age 94, left hemisphere 408.7
2042 Male, age 76, both hemispheres 405.0
1977 Female, age 85, both hemispheres 399.7
2619 Male, age 74, both hemispheres 397.2
2729 Female, age 91, right hemisphere 372.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 423.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 423.5
Samples: 197

Max nTPM: 923.8
Min nTPM: 206.6
Std nTPM: 104.0
Median nTPM: 408.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 923.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 828.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 792.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 770.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 701.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 651.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 648.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 647.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 647.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 618.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 583.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 444.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 444.9
FF:10169-103B7 60 years, female 554.5
FF:10153-102I9 76 years, female 335.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 62.1
Samples: 4

Max nTPM: 86.5
Min nTPM: 50.1
Sample A Female 86.5
Sample B Female 51.4
Sample C Male 60.5
Sample D Male 50.1
Entorhinal cortex
nTPM: 53.5
Samples: 4

Max nTPM: 55.4
Min nTPM: 52.4
Sample A Female 55.4
Sample B Female 52.4
Sample C Male 53.1
Sample D Male 53.1
Subiculum
nTPM: 52.5
Samples: 4

Max nTPM: 72.4
Min nTPM: 44.6
Sample A Female 72.4
Sample B Female 44.6
Sample C Male 46.6
Sample D Male 46.4
Ventral hippocampus
nTPM: 58.8
Samples: 4

Max nTPM: 71.7
Min nTPM: 39.4
Sample A Female 62.3
Sample B Female 39.4
Sample C Male 71.7
Sample D Male 61.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 186.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 183.2
Samples: 4

Max nTPM: 189.4
Min nTPM: 176.6
Sample A Male 176.6
Sample B Male 189.3
Sample C Female 177.4
Sample D Female 189.4
Hippocampal formation
nTPM: 186.7
Samples: 4

Max nTPM: 218.2
Min nTPM: 164.7
Sample A Male 190.9
Sample B Male 173.0
Sample C Female 164.7
Sample D Female 218.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
68117986 Antisense, RP_040929_01_H04, Mouse strain C57BL/6J (56 days, male) 9.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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