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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.9 nTPM
HPA:32.9 nTPM
GTEx:18.8 nTPM
FANTOM5:91.9 Scaled Tags Per Million
Pig:44.8 nTPM
Mouse:18.0 nTPM
Allen mouse:1.7 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 32.9
Sample id Sample description nTPM
Amygdala
nTPM: 32.9
2514 Male, age 75, right hemisphere 34.7
2695 Female, age 67, right hemisphere 34.4
1987 Female, age 91, left hemisphere 33.6
2517 Female, age 94, left hemisphere 32.9
2814 Male, age 76, right hemisphere 29.0
Basal amygdala
nTPM: 30.5
2609 Male, age 75, right hemisphere 33.3
2243 Female, age 91, right hemisphere 32.8
2685 Female, age 94, left hemisphere 29.5
1955 Male, age 76, both hemispheres 29.4
2110 Male, age 80, left hemisphere 29.1
2827 Female, age 67, right hemisphere 28.7
Central amygdala
nTPM: 31.4
2701 Female, age 91, right hemisphere 33.3
2826 Female, age 94, left hemisphere 32.4
2515 Male, age 75, right hemisphere 31.9
1905 Male, age 76, both hemispheres 29.9
2239 Male, age 80, left hemisphere 29.4
Corticomedial amygdala
nTPM: 31.0
2428 Male, age 75, right hemisphere 35.3
2242 Female, age 91, right hemisphere 32.6
2240 Male, age 76, both hemispheres 30.5
2429 Female, age 94, left hemisphere 30.4
2829 Male, age 80, left hemisphere 28.9
2535 Female, age 67, right hemisphere 28.5
Lateral amygdala
nTPM: 31.6
2255 Female, age 91, right hemisphere 34.9
2516 Male, age 75, right hemisphere 32.5
2256 Male, age 80, left hemisphere 31.9
2830 Female, age 67, right hemisphere 31.3
2534 Female, age 94, left hemisphere 30.4
1883 Male, age 76, both hemispheres 28.6
Stria terminalis, bed nucleus
nTPM: 27.1
2201 Male, age 74, unknown 30.2
1974 Female, age 91, both hemispheres 25.6
2486 Female, age 94, both hemispheres 25.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 18.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 18.8
Samples: 152

Max nTPM: 82.0
Min nTPM: 4.8
Std nTPM: 10.0
Median nTPM: 16.1
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 82.0
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 54.6
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 44.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 40.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 39.9
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 38.7
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 38.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 37.0
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 35.8
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 35.3
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 33.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 91.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 91.9
FF:10151-102I7 76 years, female 91.9

AMYGDALA - Pig RNA-seqi
Average nTPM 44.8
Pig sample Sample description nTPM
Amygdala
nTPM: 44.8
Samples: 4

Max nTPM: 50.1
Min nTPM: 41.7
Sample A Female 41.7
Sample B Female 50.1
Sample C Male 43.9
Sample D Male 43.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 18.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 18.1
Samples: 4

Max nTPM: 24.7
Min nTPM: 13.7
Sample A Male 13.7
Sample B Male 16.7
Sample C Female 24.7
Sample D Female 17.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.7
75695652 Antisense, RP_060518_04_C03, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.