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ACTA2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:53.4 nTPM
HPA:53.4 nTPM
GTEx:35.8 nTPM
FANTOM5:11.6 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:15.9 nTPM
Allen mouse:23.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041264Antibody HPA041271Antibody CAB000002Antibody CAB003761Antibody CAB013531
Glial cells Not detectedNot detectedNot detectedNot detectedNot detected
Neuronal cells MediumNot detectedNot detectedNot detectedNot detected











HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.4
Sample id Sample description nTPM
Hippocampus
nTPM: 53.0
2529 Female, age 94, left hemisphere 55.9
1855 Male, age 76, left hemisphere 54.2
2621 Female, age 67, right hemisphere 53.8
1911 Female, age 85, right hemisphere 51.8
1898 Male, age 80, left hemisphere 51.4
2148 Female, age 91, left hemisphere 51.0
Dentate gyrus
nTPM: 52.9
2531 Female, age 67, both hemispheres 57.2
2528 Male, age 74, both hemispheres 56.0
2010 Male, age 76, both hemispheres 51.9
2530 Female, age 94, left hemisphere 51.7
1927 Female, age 91, both hemispheres 50.4
2246 Female, age 85, both hemispheres 50.2
Entorhinal gyrus
nTPM: 51.7
1787 Male, age 76, left hemisphere 53.4
2686 Male, age 75, right hemisphere 53.4
2117 Female, age 91, right hemisphere 51.5
1938 Female, age 85, left hemisphere 51.3
2613 Female, age 94, left hemisphere 50.4
2764 Male, age 80, right hemisphere 50.1
Hippocampus, CA1
nTPM: 50.6
2045 Male, age 76, both hemispheres 54.4
2082 Female, age 91, right hemisphere 50.9
1873 Female, age 85, both hemispheres 50.7
2527 Male, age 74, both hemispheres 50.6
2749 Male, age 80, left hemisphere 46.7
Hippocampus, CA2
nTPM: 52.0
2437 Female, age 94, left hemisphere 54.6
2113 Female, age 91, right hemisphere 52.5
1940 Female, age 85, left hemisphere 52.1
1963 Male, age 80, left hemisphere 51.5
1892 Male, age 76, both hemispheres 50.9
2249 Male, age 74, both hemispheres 50.4
Hippocampus, CA3
nTPM: 52.1
2861 Female, age 67, both hemispheres 55.7
1891 Female, age 85, both hemispheres 52.3
1867 Male, age 76, both hemispheres 51.8
2137 Male, age 80, left hemisphere 51.7
2620 Female, age 94, left hemisphere 51.2
2436 Male, age 74, both hemispheres 50.0
Parahippocampal cortex
nTPM: 52.6
2250 Female, age 67, right hemisphere 56.2
1990 Female, age 91, right hemisphere 55.4
2018 Male, age 76, both hemispheres 55.3
2245 Female, age 91, both hemispheres 53.4
2622 Female, age 67, right hemisphere 51.9
2693 Female, age 94, both hemispheres 51.5
1850 Male, age 80, both hemispheres 50.6
2532 Female, age 72, left hemisphere 50.6
2692 Male, age 74, both hemispheres 50.5
1933 Female, age 85, both hemispheres 50.4
Perirhinal gyrus
nTPM: 53.4
2521 Female, age 94, right hemisphere 57.4
1841 Female, age 85, right hemisphere 55.2
2848 Male, age 76, right hemisphere 53.1
1794 Male, age 80, right hemisphere 51.2
1847 Female, age 91, left hemisphere 50.2
Subiculum
nTPM: 51.7
2042 Male, age 76, both hemispheres 53.0
2438 Female, age 94, left hemisphere 52.7
2619 Male, age 74, both hemispheres 52.3
2729 Female, age 91, right hemisphere 51.8
1977 Female, age 85, both hemispheres 51.1
1901 Male, age 80, both hemispheres 49.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.8
Samples: 197

Max nTPM: 282.0
Min nTPM: 6.7
Std nTPM: 30.3
Median nTPM: 28.0
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 282.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 163.9
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 121.5
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 116.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 114.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 113.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 104.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 102.0
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 101.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 97.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 89.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.6
FF:10153-102I9 76 years, female 15.9
FF:10169-103B7 60 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.0
Samples: 4

Max nTPM: 12.5
Min nTPM: 2.5
Sample A Female 2.5
Sample B Female 4.2
Sample C Male 12.5
Sample D Male 4.9
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 21.0
Min nTPM: 1.5
Sample A Female 20.9
Sample B Female 14.2
Sample C Male 21.0
Sample D Male 1.5
Subiculum
nTPM: 10.2
Samples: 4

Max nTPM: 17.1
Min nTPM: 1.6
Sample A Female 6.3
Sample B Female 1.6
Sample C Male 17.1
Sample D Male 15.9
Ventral hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 73.4
Min nTPM: 3.7
Sample A Female 3.7
Sample B Female 7.6
Sample C Male 73.4
Sample D Male 4.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.9
Samples: 4

Max nTPM: 22.4
Min nTPM: 9.4
Sample A Male 18.4
Sample B Male 9.4
Sample C Female 22.4
Sample D Female 13.3
Hippocampal formation
nTPM: 13.9
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.2
Sample A Male 13.7
Sample B Male 13.2
Sample C Female 12.2
Sample D Female 16.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.6
68743877 Antisense, RP_050203_01_G07, Mouse strain C57BL/6J (56 days, male) 23.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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