ABOUTMENU
HELP
NEWS
GOSR1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.2 nTPM
HPA:10.2 nTPM
GTEx:10.0 nTPM
FANTOM5:68.9 Scaled Tags Per Million
Pig:35.0 nTPM
Mouse:25.1 nTPM
Allen mouse:0.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 10.2
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 9.3
2586 Male, age 75, left hemisphere 12.6
1870 Female, age 42, unknown 9.4
2019 Male, age 18, unknown 9.3
2666 Male, age 74, left hemisphere 9.2
1833 Male, age 53, unknown 9.1
1830 Male, age 51, unknown 9.0
2411 Female, age 72, unknown 9.0
1827 Male, age 72, unknown 8.7
2828 Female, age 72, unknown 8.5
2219 Male, age 76, both hemispheres 8.4
Dorsal raphe nucleus
nTPM: 7.9
2750 Male, age 76, both hemispheres 8.9
1828 Male, age 53, unknown 8.5
2016 Female, age 72, unknown 7.9
2047 Male, age 72, unknown 7.7
2298 Female, age 72, unknown 6.6
Inferior colliculus
nTPM: 9.2
1890 Male, age 53, unknown 10.0
1848 Female, age 42, unknown 9.4
2849 Male, age 72, unknown 9.2
2097 Female, age 72, unknown 8.2
Median raphe nucleus
nTPM: 10.2
2220 Male, age 76, midline 10.2
Pedunculopontine tegmental nucleus
nTPM: 8.7
2334 Male, age 80, both hemispheres 9.3
2338 Male, age 61, both hemispheres 8.7
1921 Female, age 85, both hemispheres 8.2
Periaquaductal grey, anterior
nTPM: 9.4
2502 Female, age 75, unknown 11.0
1947 Male, age 18, unknown 9.2
1795 Male, age 51, unknown 8.0
Periaquaductal grey, dorsal
nTPM: 9.0
1840 Male, age 53, unknown 9.6
2850 Male, age 76, both hemispheres 9.6
2464 Female, age 72, unknown 8.6
1831 Male, age 72, unknown 8.0
Periaquaductal grey, lateral
nTPM: 8.7
2140 Male, age 76, both hemispheres 10.7
2053 Male, age 18, unknown 8.3
2272 Male, age 74, both hemispheres 7.3
Pretectal area
nTPM: 8.8
1817 Female, age 42, unknown 10.3
2407 Male, age 75, both hemispheres 9.8
1944 Female, age 72, unknown 9.4
2007 Male, age 72, unknown 9.2
1816 Male, age 51, unknown 9.1
2825 Male, age 18, unknown 8.9
2667 Female, age 75, unknown 8.8
1815 Male, age 53, unknown 8.6
2316 Male, age 76, right hemisphere 8.5
2224 Female, age 72, unknown 7.0
2273 Male, age 74, both hemispheres 6.8
Red nucleus
nTPM: 9.1
2584 Male, age 75, left hemisphere 10.9
2588 Male, age 74, left hemisphere 9.8
1821 Female, age 72, unknown 9.3
1865 Male, age 51, unknown 9.3
2725 Female, age 75, unknown 9.3
2769 Male, age 72, unknown 9.3
1954 Female, age 42, unknown 8.9
2785 Male, age 18, unknown 8.7
2823 Male, age 76, right hemisphere 8.7
1904 Male, age 53, unknown 8.6
2227 Male, age 72, unknown 8.6
2503 Female, age 72, unknown 8.1
Substantia nigra
nTPM: 9.5
2699 Male, age 18, unknown 11.1
2241 Male, age 72, unknown 11.0
1851 Male, age 51, unknown 10.1
2665 Male, age 74, both hemispheres 9.7
1916 Female, age 42, unknown 9.6
2583 Male, age 75, right hemisphere 9.5
1889 Female, age 72, unknown 9.2
1941 Male, age 53, unknown 8.8
2409 Female, age 72, unknown 8.2
2590 Female, age 75, unknown 8.1
Superior colliculus
nTPM: 9.0
2664 Male, age 75, both hemispheres 11.3
1895 Male, age 76, right hemisphere 9.4
1839 Male, age 51, unknown 9.2
1995 Male, age 72, unknown 9.1
1796 Male, age 53, unknown 9.0
2087 Female, age 72, unknown 9.0
2668 Female, age 75, unknown 8.7
1913 Female, age 42, unknown 8.6
2261 Male, age 18, unknown 8.2
2587 Male, age 74, left hemisphere 7.6
Ventral tegmental area
nTPM: 9.0
2218 Male, age 76, both hemispheres 9.5
1942 Male, age 51, unknown 9.3
1915 Female, age 42, unknown 9.2
2223 Female, age 72, unknown 8.9
2410 Female, age 72, unknown 8.8
2021 Male, age 53, unknown 8.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 10.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 10.0
Samples: 139

Max nTPM: 16.6
Min nTPM: 6.1
Std nTPM: 1.7
Median nTPM: 10.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 16.6
GTEX-1B996-0011-R2a-SM-7IGON 60-69 years, male 14.5
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 14.1
GTEX-1H23P-0011-R2a-SM-CKZP3 60-69 years, male 13.9
GTEX-QDT8-0011-R2A-SM-32PKQ 30-39 years, female 13.6
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 13.3
GTEX-14PJO-0011-R2a-SM-5ZZVF 60-69 years, male 13.1
GTEX-1I1GV-0011-R2a-SM-ARZLF 60-69 years, male 13.0
GTEX-11UD1-0011-R2b-SM-5BC6O 40-49 years, female 12.7
GTEX-13X6K-0011-R2b-SM-5P9K3 60-69 years, female 12.7
GTEX-1GTWX-0011-R2b-SM-ADEH5 60-69 years, male 12.7
Show allShow less

MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 68.9
FF:10158-103A5 76 years, female 68.9

MIDBRAIN - Pig RNA-seqi
Average nTPM 35.0
Pig sample Sample description nTPM
Midbrain
nTPM: 35.1
Samples: 4

Max nTPM: 39.4
Min nTPM: 31.2
Sample A Female 39.4
Sample B Female 37.2
Sample C Male 31.2
Sample D Male 32.5
Periaqueductal gray
nTPM: 33.3
Samples: 3

Max nTPM: 34.9
Min nTPM: 31.8
Sample B Female 34.9
Sample C Male 31.8
Sample D Male 33.2
Substantia nigra
nTPM: 34.4
Samples: 4

Max nTPM: 38.1
Min nTPM: 31.0
Sample A Female 38.1
Sample B Female 31.0
Sample C Male 33.6
Sample D Male 34.7
Superior colliculi
nTPM: 31.0
Samples: 4

Max nTPM: 33.3
Min nTPM: 25.5
Sample A Female 33.3
Sample B Female 25.5
Sample C Male 32.3
Sample D Male 33.0

MIDBRAIN - Mouse RNA-seqi
Average nTPM 25.1
Mouse sample Sample description nTPM
Midbrain
nTPM: 25.1
Samples: 4

Max nTPM: 26.3
Min nTPM: 23.7
Sample A Male 23.7
Sample B Male 24.8
Sample C Female 26.3
Sample D Female 25.6

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.1
100144152 Antisense, RP_110421_01_B06, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.