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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:53.6 nTPM
HPA:53.6 nTPM
GTEx:37.1 nTPM
FANTOM5:52.8 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:27.7 nTPM
Allen mouse:0.4 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 53.6
Sample id Sample description nTPM
Amygdala
nTPM: 53.2
1987 Female, age 91, left hemisphere 57.6
2695 Female, age 67, right hemisphere 55.1
2514 Male, age 75, right hemisphere 54.3
2517 Female, age 94, left hemisphere 49.7
2814 Male, age 76, right hemisphere 49.3
Basal amygdala
nTPM: 49.0
2609 Male, age 75, right hemisphere 53.8
2827 Female, age 67, right hemisphere 50.0
2110 Male, age 80, left hemisphere 49.7
2243 Female, age 91, right hemisphere 48.3
2685 Female, age 94, left hemisphere 47.8
1955 Male, age 76, both hemispheres 44.6
Central amygdala
nTPM: 53.6
2515 Male, age 75, right hemisphere 59.5
2826 Female, age 94, left hemisphere 56.0
2701 Female, age 91, right hemisphere 55.0
2239 Male, age 80, left hemisphere 50.0
1905 Male, age 76, both hemispheres 47.7
Corticomedial amygdala
nTPM: 48.2
2428 Male, age 75, right hemisphere 53.2
2829 Male, age 80, left hemisphere 52.5
2242 Female, age 91, right hemisphere 50.9
2535 Female, age 67, right hemisphere 46.4
2240 Male, age 76, both hemispheres 43.1
2429 Female, age 94, left hemisphere 43.0
Lateral amygdala
nTPM: 52.7
2830 Female, age 67, right hemisphere 60.1
2256 Male, age 80, left hemisphere 52.5
2516 Male, age 75, right hemisphere 51.6
2255 Female, age 91, right hemisphere 51.1
1883 Male, age 76, both hemispheres 50.6
2534 Female, age 94, left hemisphere 50.5
Stria terminalis, bed nucleus
nTPM: 46.7
2201 Male, age 74, unknown 54.6
1974 Female, age 91, both hemispheres 43.2
2486 Female, age 94, both hemispheres 42.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 37.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 37.1
Samples: 152

Max nTPM: 85.2
Min nTPM: 17.1
Std nTPM: 11.0
Median nTPM: 34.9
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 85.2
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 77.2
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 73.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 68.7
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 66.6
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 66.3
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 58.9
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 58.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 56.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 55.9
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 55.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 52.8
FF:10151-102I7 76 years, female 52.8

AMYGDALA - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Amygdala
nTPM: 17.5
Samples: 4

Max nTPM: 23.7
Min nTPM: 15.1
Sample A Female 23.7
Sample B Female 15.6
Sample C Male 15.1
Sample D Male 15.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 27.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 27.7
Samples: 4

Max nTPM: 34.5
Min nTPM: 24.2
Sample A Male 34.5
Sample B Male 24.2
Sample C Female 24.8
Sample D Female 27.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.4
74357572 Antisense, RP_050915_03_A02, Mouse strain C57BL/6J (56 days, male) 0.4
72004459 Antisense, RP_050915_03_A02, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.