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LUC7L3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:128.4 nTPM
HPA:128.4 nTPM
GTEx:128.0 nTPM
FANTOM5:300.0 Scaled Tags Per Million
Pig:29.2 nTPM
Mouse:53.7 nTPM
Allen mouse:2.2 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 128.4
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 123.4
1830 Male, age 51, unknown 129.9
1833 Male, age 53, unknown 129.1
2219 Male, age 76, both hemispheres 128.2
1870 Female, age 42, unknown 126.1
1827 Male, age 72, unknown 124.3
2411 Female, age 72, unknown 124.0
2828 Female, age 72, unknown 123.4
2019 Male, age 18, unknown 122.1
2666 Male, age 74, left hemisphere 120.3
2586 Male, age 75, left hemisphere 106.9
Dorsal raphe nucleus
nTPM: 118.3
2750 Male, age 76, both hemispheres 123.4
2016 Female, age 72, unknown 122.3
1828 Male, age 53, unknown 118.2
2047 Male, age 72, unknown 114.1
2298 Female, age 72, unknown 113.8
Inferior colliculus
nTPM: 122.9
2849 Male, age 72, unknown 124.2
1890 Male, age 53, unknown 123.9
1848 Female, age 42, unknown 123.1
2097 Female, age 72, unknown 120.5
Median raphe nucleus
nTPM: 125.2
2220 Male, age 76, midline 125.2
Pedunculopontine tegmental nucleus
nTPM: 126.1
2338 Male, age 61, both hemispheres 130.6
1921 Female, age 85, both hemispheres 123.9
2334 Male, age 80, both hemispheres 123.9
Periaquaductal grey, anterior
nTPM: 121.0
2502 Female, age 75, unknown 122.7
1947 Male, age 18, unknown 121.8
1795 Male, age 51, unknown 118.3
Periaquaductal grey, dorsal
nTPM: 124.7
1831 Male, age 72, unknown 128.2
2850 Male, age 76, both hemispheres 127.7
2464 Female, age 72, unknown 126.1
1840 Male, age 53, unknown 116.8
Periaquaductal grey, lateral
nTPM: 123.2
2140 Male, age 76, both hemispheres 125.2
2053 Male, age 18, unknown 124.2
2272 Male, age 74, both hemispheres 120.2
Pretectal area
nTPM: 122.6
2316 Male, age 76, right hemisphere 126.2
2667 Female, age 75, unknown 125.5
1815 Male, age 53, unknown 124.9
2407 Male, age 75, both hemispheres 124.4
2825 Male, age 18, unknown 123.4
1816 Male, age 51, unknown 121.6
2224 Female, age 72, unknown 121.6
2007 Male, age 72, unknown 121.5
2273 Male, age 74, both hemispheres 121.3
1944 Female, age 72, unknown 119.0
1817 Female, age 42, unknown 118.8
Red nucleus
nTPM: 128.4
2503 Female, age 72, unknown 138.5
2823 Male, age 76, right hemisphere 135.1
1865 Male, age 51, unknown 133.1
1954 Female, age 42, unknown 132.2
1904 Male, age 53, unknown 131.6
2227 Male, age 72, unknown 129.3
2769 Male, age 72, unknown 127.0
1821 Female, age 72, unknown 125.8
2588 Male, age 74, left hemisphere 125.8
2725 Female, age 75, unknown 123.1
2785 Male, age 18, unknown 122.5
2584 Male, age 75, left hemisphere 116.8
Substantia nigra
nTPM: 119.0
2409 Female, age 72, unknown 129.4
2699 Male, age 18, unknown 124.9
1889 Female, age 72, unknown 120.0
2583 Male, age 75, right hemisphere 119.9
2590 Female, age 75, unknown 119.6
2665 Male, age 74, both hemispheres 118.3
1941 Male, age 53, unknown 118.0
1851 Male, age 51, unknown 114.5
2241 Male, age 72, unknown 113.3
1916 Female, age 42, unknown 112.3
Superior colliculus
nTPM: 123.4
1913 Female, age 42, unknown 133.4
1895 Male, age 76, right hemisphere 129.7
1995 Male, age 72, unknown 129.5
2087 Female, age 72, unknown 122.9
1839 Male, age 51, unknown 122.2
2668 Female, age 75, unknown 121.9
2587 Male, age 74, left hemisphere 121.5
2261 Male, age 18, unknown 119.9
1796 Male, age 53, unknown 119.7
2664 Male, age 75, both hemispheres 112.8
Ventral tegmental area
nTPM: 121.1
2223 Female, age 72, unknown 125.0
2218 Male, age 76, both hemispheres 123.0
2021 Male, age 53, unknown 120.9
1942 Male, age 51, unknown 119.7
2410 Female, age 72, unknown 119.5
1915 Female, age 42, unknown 118.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 128.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 128.0
Samples: 139

Max nTPM: 308.7
Min nTPM: 62.7
Std nTPM: 39.1
Median nTPM: 115.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 308.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 249.3
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 247.8
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 216.3
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 211.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 206.9
GTEX-N7MT-0011-R2a-SM-2I3GI 60-69 years, female 203.9
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 200.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 198.3
GTEX-139TS-0011-R2b-SM-5J1MX 60-69 years, male 192.3
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 189.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 300.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 300.0
FF:10158-103A5 76 years, female 300.0

MIDBRAIN - Pig RNA-seqi
Average nTPM 29.2
Pig sample Sample description nTPM
Midbrain
nTPM: 26.5
Samples: 4

Max nTPM: 28.9
Min nTPM: 24.2
Sample A Female 24.2
Sample B Female 28.9
Sample C Male 24.7
Sample D Male 28.2
Periaqueductal gray
nTPM: 29.2
Samples: 3

Max nTPM: 31.6
Min nTPM: 26.4
Sample B Female 29.7
Sample C Male 26.4
Sample D Male 31.6
Substantia nigra
nTPM: 26.9
Samples: 4

Max nTPM: 35.7
Min nTPM: 18.0
Sample A Female 18.0
Sample B Female 27.3
Sample C Male 26.5
Sample D Male 35.7
Superior colliculi
nTPM: 23.6
Samples: 4

Max nTPM: 29.0
Min nTPM: 16.8
Sample A Female 16.8
Sample B Female 22.9
Sample C Male 25.6
Sample D Male 29.0

MIDBRAIN - Mouse RNA-seqi
Average nTPM 53.7
Mouse sample Sample description nTPM
Midbrain
nTPM: 53.7
Samples: 4

Max nTPM: 57.0
Min nTPM: 49.2
Sample A Male 54.7
Sample B Male 57.0
Sample C Female 53.8
Sample D Female 49.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 2.2
69407511 Antisense, RP_050414_01_G09, Mouse strain C57BL/6J (56 days, male) 2.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.