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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:43.7 nTPM
HPA:43.7 nTPM
GTEx:39.9 nTPM
FANTOM5:99.3 Scaled Tags Per Million
Pig:82.5 nTPM
Mouse:84.4 nTPM
Allen mouse:6.9 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 43.7
Sample id Sample description nTPM
Amygdala
nTPM: 38.4
1987 Female, age 91, left hemisphere 47.0
2695 Female, age 67, right hemisphere 40.0
2517 Female, age 94, left hemisphere 38.5
2514 Male, age 75, right hemisphere 35.2
2814 Male, age 76, right hemisphere 31.2
Basal amygdala
nTPM: 35.1
2609 Male, age 75, right hemisphere 47.8
2110 Male, age 80, left hemisphere 40.7
2243 Female, age 91, right hemisphere 36.9
1955 Male, age 76, both hemispheres 31.5
2685 Female, age 94, left hemisphere 30.1
2827 Female, age 67, right hemisphere 23.8
Central amygdala
nTPM: 43.7
2239 Male, age 80, left hemisphere 54.9
2515 Male, age 75, right hemisphere 49.1
2701 Female, age 91, right hemisphere 45.0
2826 Female, age 94, left hemisphere 38.7
1905 Male, age 76, both hemispheres 30.7
Corticomedial amygdala
nTPM: 33.0
2428 Male, age 75, right hemisphere 42.5
2829 Male, age 80, left hemisphere 40.5
2242 Female, age 91, right hemisphere 31.6
2429 Female, age 94, left hemisphere 28.7
2535 Female, age 67, right hemisphere 28.3
2240 Male, age 76, both hemispheres 26.3
Lateral amygdala
nTPM: 40.8
2255 Female, age 91, right hemisphere 59.4
2256 Male, age 80, left hemisphere 50.8
2516 Male, age 75, right hemisphere 45.5
1883 Male, age 76, both hemispheres 31.8
2534 Female, age 94, left hemisphere 30.7
2830 Female, age 67, right hemisphere 26.5
Stria terminalis, bed nucleus
nTPM: 32.5
2486 Female, age 94, both hemispheres 36.8
2201 Male, age 74, unknown 32.9
1974 Female, age 91, both hemispheres 27.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 39.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 39.9
Samples: 152

Max nTPM: 96.1
Min nTPM: 5.2
Std nTPM: 15.8
Median nTPM: 38.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 96.1
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 89.7
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 83.0
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 74.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 73.5
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 69.3
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 68.4
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 66.0
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 65.7
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 64.6
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 63.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 99.3
FF:10151-102I7 76 years, female 99.3

AMYGDALA - Pig RNA-seqi
Average nTPM 82.5
Pig sample Sample description nTPM
Amygdala
nTPM: 82.5
Samples: 4

Max nTPM: 110.7
Min nTPM: 65.7
Sample A Female 110.7
Sample B Female 70.9
Sample C Male 65.7
Sample D Male 82.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 84.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 84.4
Samples: 4

Max nTPM: 94.1
Min nTPM: 76.4
Sample A Male 94.1
Sample B Male 76.4
Sample C Female 76.8
Sample D Female 90.2

AMYGDALA - Allen Mouse ISHi
Max Expression energy 6.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 6.9
74881161 Antisense, RP_060220_01_A10, Mouse strain C57BL/6J (56 days, male) 7.6
68924527 Antisense, RP_050303_02_E06, Mouse strain C57BL/6J (56 days, male) 6.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.