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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:47.1 nTPM
HPA:47.1 nTPM
GTEx:14.8 nTPM
FANTOM5:43.5 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:5.4 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042110
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.1
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
2529 Female, age 94, left hemisphere 16.6
2621 Female, age 67, right hemisphere 15.8
2148 Female, age 91, left hemisphere 12.4
1911 Female, age 85, right hemisphere 11.5
1898 Male, age 80, left hemisphere 11.1
1855 Male, age 76, left hemisphere 10.3
Dentate gyrus
nTPM: 11.6
2530 Female, age 94, left hemisphere 13.6
2246 Female, age 85, both hemispheres 12.7
2531 Female, age 67, both hemispheres 11.9
2528 Male, age 74, both hemispheres 11.4
2010 Male, age 76, both hemispheres 10.4
1927 Female, age 91, both hemispheres 9.8
Entorhinal gyrus
nTPM: 10.3
2686 Male, age 75, right hemisphere 12.3
1938 Female, age 85, left hemisphere 11.6
2117 Female, age 91, right hemisphere 11.6
2764 Male, age 80, right hemisphere 9.8
1787 Male, age 76, left hemisphere 8.3
2613 Female, age 94, left hemisphere 7.8
Hippocampus, CA1
nTPM: 11.4
2527 Male, age 74, both hemispheres 18.1
2082 Female, age 91, right hemisphere 11.1
2749 Male, age 80, left hemisphere 10.8
1873 Female, age 85, both hemispheres 9.3
2045 Male, age 76, both hemispheres 7.5
Hippocampus, CA2
nTPM: 17.9
2249 Male, age 74, both hemispheres 48.6
1940 Female, age 85, left hemisphere 16.9
2113 Female, age 91, right hemisphere 12.0
2437 Female, age 94, left hemisphere 11.5
1963 Male, age 80, left hemisphere 9.3
1892 Male, age 76, both hemispheres 8.9
Hippocampus, CA3
nTPM: 47.1
2436 Male, age 74, both hemispheres 230.8
2861 Female, age 67, both hemispheres 13.7
1867 Male, age 76, both hemispheres 10.2
2137 Male, age 80, left hemisphere 10.1
2620 Female, age 94, left hemisphere 9.2
1891 Female, age 85, both hemispheres 8.4
Parahippocampal cortex
nTPM: 11.6
2245 Female, age 91, both hemispheres 15.6
2692 Male, age 74, both hemispheres 14.6
2622 Female, age 67, right hemisphere 13.2
1933 Female, age 85, both hemispheres 12.3
2250 Female, age 67, right hemisphere 12.0
2532 Female, age 72, left hemisphere 11.3
2693 Female, age 94, both hemispheres 10.2
1990 Female, age 91, right hemisphere 9.5
2018 Male, age 76, both hemispheres 9.2
1850 Male, age 80, both hemispheres 8.2
Perirhinal gyrus
nTPM: 9.8
2521 Female, age 94, right hemisphere 12.9
1794 Male, age 80, right hemisphere 11.1
1847 Female, age 91, left hemisphere 8.8
1841 Female, age 85, right hemisphere 8.7
2848 Male, age 76, right hemisphere 7.5
Subiculum
nTPM: 10.6
2438 Female, age 94, left hemisphere 12.9
2619 Male, age 74, both hemispheres 12.2
2729 Female, age 91, right hemisphere 10.5
2042 Male, age 76, both hemispheres 9.6
1901 Male, age 80, both hemispheres 9.4
1977 Female, age 85, both hemispheres 9.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.8
Samples: 197

Max nTPM: 67.8
Min nTPM: 3.0
Std nTPM: 9.1
Median nTPM: 12.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 67.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 54.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 50.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 41.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 34.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 34.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 32.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 31.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 31.5
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 30.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 30.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.5
FF:10153-102I9 76 years, female 69.2
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 32.9
Min nTPM: 5.8
Sample A Female 32.9
Sample B Female 7.3
Sample C Male 24.2
Sample D Male 5.8
Entorhinal cortex
nTPM: 5.7
Samples: 4

Max nTPM: 7.6
Min nTPM: 3.9
Sample A Female 6.2
Sample B Female 5.1
Sample C Male 3.9
Sample D Male 7.6
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 12.2
Min nTPM: 5.8
Sample A Female 12.2
Sample B Female 5.8
Sample C Male 6.7
Sample D Male 10.9
Ventral hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 18.6
Min nTPM: 4.6
Sample A Female 18.1
Sample B Female 4.6
Sample C Male 14.5
Sample D Male 18.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.9
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.3
Sample A Male 5.4
Sample B Male 4.3
Sample C Female 5.1
Sample D Female 4.9
Hippocampal formation
nTPM: 5.4
Samples: 4

Max nTPM: 7.0
Min nTPM: 4.0
Sample A Male 4.0
Sample B Male 5.2
Sample C Female 5.4
Sample D Female 7.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
74273308 Antisense, RP_050927_02_G02, Mouse strain C57BL/6J (56 days, male) 2.5
75694451 Antisense, RP_060518_03_G09, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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