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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:29.2 nTPM
HPA:29.2 nTPM
GTEx:23.1 nTPM
FANTOM5:23.7 Scaled Tags Per Million
Pig:16.2 nTPM
Mouse:11.0 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006417Antibody HPA024321
Glial cells HighLow
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
1855 Male, age 76, left hemisphere 28.6
2529 Female, age 94, left hemisphere 28.4
2621 Female, age 67, right hemisphere 28.0
1898 Male, age 80, left hemisphere 27.9
1911 Female, age 85, right hemisphere 27.9
2148 Female, age 91, left hemisphere 26.5
Dentate gyrus
nTPM: 27.6
2530 Female, age 94, left hemisphere 29.2
2010 Male, age 76, both hemispheres 28.7
2528 Male, age 74, both hemispheres 28.2
2246 Female, age 85, both hemispheres 27.1
2531 Female, age 67, both hemispheres 26.6
1927 Female, age 91, both hemispheres 26.0
Entorhinal gyrus
nTPM: 27.6
2117 Female, age 91, right hemisphere 30.4
2764 Male, age 80, right hemisphere 28.1
1787 Male, age 76, left hemisphere 28.0
1938 Female, age 85, left hemisphere 27.5
2613 Female, age 94, left hemisphere 26.6
2686 Male, age 75, right hemisphere 24.8
Hippocampus, CA1
nTPM: 27.4
2749 Male, age 80, left hemisphere 29.6
2527 Male, age 74, both hemispheres 27.0
1873 Female, age 85, both hemispheres 26.9
2082 Female, age 91, right hemisphere 26.9
2045 Male, age 76, both hemispheres 26.6
Hippocampus, CA2
nTPM: 28.5
1963 Male, age 80, left hemisphere 29.7
2249 Male, age 74, both hemispheres 29.7
1892 Male, age 76, both hemispheres 28.7
1940 Female, age 85, left hemisphere 27.7
2437 Female, age 94, left hemisphere 27.7
2113 Female, age 91, right hemisphere 27.3
Hippocampus, CA3
nTPM: 27.4
1891 Female, age 85, both hemispheres 29.7
1867 Male, age 76, both hemispheres 29.5
2436 Male, age 74, both hemispheres 29.2
2137 Male, age 80, left hemisphere 26.4
2620 Female, age 94, left hemisphere 25.0
2861 Female, age 67, both hemispheres 24.5
Parahippocampal cortex
nTPM: 27.3
1990 Female, age 91, right hemisphere 28.7
2532 Female, age 72, left hemisphere 28.5
2018 Male, age 76, both hemispheres 28.3
2692 Male, age 74, both hemispheres 28.2
1850 Male, age 80, both hemispheres 27.3
1933 Female, age 85, both hemispheres 27.3
2250 Female, age 67, right hemisphere 26.8
2245 Female, age 91, both hemispheres 26.6
2693 Female, age 94, both hemispheres 26.3
2622 Female, age 67, right hemisphere 25.2
Perirhinal gyrus
nTPM: 27.0
1794 Male, age 80, right hemisphere 27.5
1841 Female, age 85, right hemisphere 27.1
2521 Female, age 94, right hemisphere 27.1
1847 Female, age 91, left hemisphere 26.8
2848 Male, age 76, right hemisphere 26.6
Subiculum
nTPM: 29.2
2042 Male, age 76, both hemispheres 31.4
1901 Male, age 80, both hemispheres 30.8
1977 Female, age 85, both hemispheres 30.0
2438 Female, age 94, left hemisphere 28.9
2619 Male, age 74, both hemispheres 27.2
2729 Female, age 91, right hemisphere 27.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.1
Samples: 197

Max nTPM: 77.2
Min nTPM: 10.4
Std nTPM: 8.3
Median nTPM: 21.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 77.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 50.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 46.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 41.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 40.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 40.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 39.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 38.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 37.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 37.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 37.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.7
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 23.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 25.2
Min nTPM: 11.3
Sample A Female 25.2
Sample B Female 13.6
Sample C Male 14.6
Sample D Male 11.3
Entorhinal cortex
nTPM: 11.8
Samples: 4

Max nTPM: 13.2
Min nTPM: 8.7
Sample A Female 13.1
Sample B Female 13.2
Sample C Male 12.0
Sample D Male 8.7
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 25.1
Min nTPM: 10.3
Sample A Female 25.1
Sample B Female 10.3
Sample C Male 10.4
Sample D Male 11.6
Ventral hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 18.9
Min nTPM: 8.5
Sample A Female 12.4
Sample B Female 8.5
Sample C Male 10.7
Sample D Male 18.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.2
Sample A Male 10.8
Sample B Male 12.1
Sample C Female 11.9
Sample D Female 9.2
Hippocampal formation
nTPM: 10.4
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.1
Sample A Male 11.5
Sample B Male 10.6
Sample C Female 9.1
Sample D Female 10.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
512749 Antisense, RP_040809_02_B07, Mouse strain C57BL/6J (56 days, male) 8.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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