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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.2 nTPM
HPA:13.2 nTPM
GTEx:31.8 nTPM
FANTOM5:48.1 Scaled Tags Per Million
Pig:34.5 nTPM
Mouse:42.1 nTPM
Allen mouse:2.8 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 13.2
Sample id Sample description nTPM
Amygdala
nTPM: 13.2
2814 Male, age 76, right hemisphere 15.4
2514 Male, age 75, right hemisphere 13.7
1987 Female, age 91, left hemisphere 13.0
2517 Female, age 94, left hemisphere 12.1
2695 Female, age 67, right hemisphere 11.6
Basal amygdala
nTPM: 11.8
2609 Male, age 75, right hemisphere 13.1
2110 Male, age 80, left hemisphere 12.4
2243 Female, age 91, right hemisphere 12.3
1955 Male, age 76, both hemispheres 11.9
2685 Female, age 94, left hemisphere 11.5
2827 Female, age 67, right hemisphere 9.5
Central amygdala
nTPM: 12.6
1905 Male, age 76, both hemispheres 14.7
2239 Male, age 80, left hemisphere 12.7
2515 Male, age 75, right hemisphere 12.2
2826 Female, age 94, left hemisphere 11.8
2701 Female, age 91, right hemisphere 11.3
Corticomedial amygdala
nTPM: 12.0
2428 Male, age 75, right hemisphere 14.0
2829 Male, age 80, left hemisphere 13.0
2429 Female, age 94, left hemisphere 12.3
2240 Male, age 76, both hemispheres 12.2
2242 Female, age 91, right hemisphere 12.0
2535 Female, age 67, right hemisphere 8.3
Lateral amygdala
nTPM: 11.9
1883 Male, age 76, both hemispheres 14.2
2516 Male, age 75, right hemisphere 14.0
2534 Female, age 94, left hemisphere 11.9
2255 Female, age 91, right hemisphere 11.0
2256 Male, age 80, left hemisphere 10.9
2830 Female, age 67, right hemisphere 9.7
Stria terminalis, bed nucleus
nTPM: 11.8
1974 Female, age 91, both hemispheres 12.6
2486 Female, age 94, both hemispheres 11.9
2201 Male, age 74, unknown 11.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 31.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 31.8
Samples: 152

Max nTPM: 51.8
Min nTPM: 13.4
Std nTPM: 6.9
Median nTPM: 31.8
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 51.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 51.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 49.7
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 49.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 47.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 47.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 45.8
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 44.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 42.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 42.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 41.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 48.1
FF:10151-102I7 76 years, female 48.1

AMYGDALA - Pig RNA-seqi
Average nTPM 34.5
Pig sample Sample description nTPM
Amygdala
nTPM: 34.5
Samples: 4

Max nTPM: 42.2
Min nTPM: 30.7
Sample A Female 42.2
Sample B Female 33.3
Sample C Male 30.7
Sample D Male 31.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 42.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 42.1
Samples: 4

Max nTPM: 45.2
Min nTPM: 37.8
Sample A Male 42.3
Sample B Male 45.2
Sample C Female 37.8
Sample D Female 43.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.8
72080084 Antisense, RP_051017_03_C03, Mouse strain C57BL/6J (56 days, male) 3.9
68920743 Antisense, RP_050303_01_B05, Mouse strain C57BL/6J (56 days, male) 1.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.