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PRPF19
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:91.3 nTPM
HPA:91.3 nTPM
GTEx:70.2 nTPM
FANTOM5:104.5 Scaled Tags Per Million
Pig:56.1 nTPM
Mouse:143.6 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038051Antibody HPA059070Antibody CAB012448
Glial cells HighMediumHigh
Neuronal cells HighHighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.3
Sample id Sample description nTPM
Hippocampus
nTPM: 67.6
1898 Male, age 80, left hemisphere 73.8
2621 Female, age 67, right hemisphere 72.3
2148 Female, age 91, left hemisphere 68.5
2529 Female, age 94, left hemisphere 65.3
1855 Male, age 76, left hemisphere 64.2
1911 Female, age 85, right hemisphere 61.7
Dentate gyrus
nTPM: 71.2
2531 Female, age 67, both hemispheres 76.6
2528 Male, age 74, both hemispheres 75.1
1927 Female, age 91, both hemispheres 74.4
2530 Female, age 94, left hemisphere 70.5
2246 Female, age 85, both hemispheres 68.2
2010 Male, age 76, both hemispheres 62.4
Entorhinal gyrus
nTPM: 80.3
2613 Female, age 94, left hemisphere 92.0
2764 Male, age 80, right hemisphere 90.6
1787 Male, age 76, left hemisphere 82.2
1938 Female, age 85, left hemisphere 81.0
2117 Female, age 91, right hemisphere 69.6
2686 Male, age 75, right hemisphere 66.2
Hippocampus, CA1
nTPM: 70.7
2749 Male, age 80, left hemisphere 81.0
2527 Male, age 74, both hemispheres 72.3
2082 Female, age 91, right hemisphere 69.7
2045 Male, age 76, both hemispheres 67.7
1873 Female, age 85, both hemispheres 63.0
Hippocampus, CA2
nTPM: 72.8
2249 Male, age 74, both hemispheres 77.0
1892 Male, age 76, both hemispheres 76.8
2437 Female, age 94, left hemisphere 76.6
1940 Female, age 85, left hemisphere 69.7
1963 Male, age 80, left hemisphere 68.8
2113 Female, age 91, right hemisphere 68.2
Hippocampus, CA3
nTPM: 73.4
2620 Female, age 94, left hemisphere 80.9
2137 Male, age 80, left hemisphere 77.7
2436 Male, age 74, both hemispheres 76.3
1867 Male, age 76, both hemispheres 71.9
2861 Female, age 67, both hemispheres 69.4
1891 Female, age 85, both hemispheres 64.1
Parahippocampal cortex
nTPM: 76.7
1850 Male, age 80, both hemispheres 84.4
1990 Female, age 91, right hemisphere 83.3
2532 Female, age 72, left hemisphere 82.7
2245 Female, age 91, both hemispheres 82.3
2250 Female, age 67, right hemisphere 80.6
1933 Female, age 85, both hemispheres 75.6
2693 Female, age 94, both hemispheres 73.5
2622 Female, age 67, right hemisphere 72.1
2018 Male, age 76, both hemispheres 69.1
2692 Male, age 74, both hemispheres 63.6
Perirhinal gyrus
nTPM: 91.3
1794 Male, age 80, right hemisphere 99.0
1847 Female, age 91, left hemisphere 98.9
1841 Female, age 85, right hemisphere 89.9
2521 Female, age 94, right hemisphere 84.4
2848 Male, age 76, right hemisphere 84.4
Subiculum
nTPM: 71.0
1977 Female, age 85, both hemispheres 81.5
2438 Female, age 94, left hemisphere 81.1
1901 Male, age 80, both hemispheres 72.2
2619 Male, age 74, both hemispheres 69.4
2729 Female, age 91, right hemisphere 62.3
2042 Male, age 76, both hemispheres 59.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.2
Samples: 197

Max nTPM: 148.3
Min nTPM: 29.5
Std nTPM: 20.4
Median nTPM: 67.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 148.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 130.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 125.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 112.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 112.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 112.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 111.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 109.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 108.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 105.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 104.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.5
FF:10169-103B7 60 years, female 108.8
FF:10153-102I9 76 years, female 100.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.1
Samples: 4

Max nTPM: 73.4
Min nTPM: 43.0
Sample A Female 73.4
Sample B Female 59.4
Sample C Male 48.5
Sample D Male 43.0
Entorhinal cortex
nTPM: 43.4
Samples: 4

Max nTPM: 51.0
Min nTPM: 37.9
Sample A Female 51.0
Sample B Female 43.5
Sample C Male 41.2
Sample D Male 37.9
Subiculum
nTPM: 43.3
Samples: 4

Max nTPM: 59.5
Min nTPM: 34.4
Sample A Female 59.5
Sample B Female 37.2
Sample C Male 41.9
Sample D Male 34.4
Ventral hippocampus
nTPM: 55.0
Samples: 4

Max nTPM: 66.4
Min nTPM: 33.6
Sample A Female 54.9
Sample B Female 33.6
Sample C Male 65.2
Sample D Male 66.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 143.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 142.3
Samples: 4

Max nTPM: 155.6
Min nTPM: 137.1
Sample A Male 138.5
Sample B Male 155.6
Sample C Female 137.1
Sample D Female 137.9
Hippocampal formation
nTPM: 143.6
Samples: 4

Max nTPM: 151.1
Min nTPM: 137.4
Sample A Male 139.0
Sample B Male 147.0
Sample C Female 137.4
Sample D Female 151.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
68191420 Antisense, RP_041129_01_B06, Mouse strain C57BL/6J (56 days, male) 12.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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