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SLC6A12
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.5 nTPM
HPA:18.5 nTPM
GTEx:19.3 nTPM
FANTOM5:7.4 Scaled Tags Per Million
Pig:4.7 nTPM
Mouse:1.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034973
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.5
Sample id Sample description nTPM
Hippocampus
nTPM: 18.3
1911 Female, age 85, right hemisphere 19.8
2529 Female, age 94, left hemisphere 19.1
2621 Female, age 67, right hemisphere 19.0
1855 Male, age 76, left hemisphere 18.5
2148 Female, age 91, left hemisphere 18.4
1898 Male, age 80, left hemisphere 15.3
Dentate gyrus
nTPM: 17.5
2530 Female, age 94, left hemisphere 20.9
2010 Male, age 76, both hemispheres 17.5
2246 Female, age 85, both hemispheres 17.4
1927 Female, age 91, both hemispheres 17.3
2531 Female, age 67, both hemispheres 16.3
2528 Male, age 74, both hemispheres 15.5
Entorhinal gyrus
nTPM: 18.0
2686 Male, age 75, right hemisphere 21.6
1787 Male, age 76, left hemisphere 20.0
2613 Female, age 94, left hemisphere 18.3
2117 Female, age 91, right hemisphere 16.6
2764 Male, age 80, right hemisphere 16.4
1938 Female, age 85, left hemisphere 15.2
Hippocampus, CA1
nTPM: 16.8
2527 Male, age 74, both hemispheres 18.9
2045 Male, age 76, both hemispheres 17.6
2082 Female, age 91, right hemisphere 17.3
1873 Female, age 85, both hemispheres 15.9
2749 Male, age 80, left hemisphere 14.5
Hippocampus, CA2
nTPM: 17.6
2437 Female, age 94, left hemisphere 19.8
1963 Male, age 80, left hemisphere 19.5
2113 Female, age 91, right hemisphere 17.7
1940 Female, age 85, left hemisphere 16.7
2249 Male, age 74, both hemispheres 16.0
1892 Male, age 76, both hemispheres 15.9
Hippocampus, CA3
nTPM: 17.7
2861 Female, age 67, both hemispheres 19.4
1891 Female, age 85, both hemispheres 18.5
2137 Male, age 80, left hemisphere 18.0
1867 Male, age 76, both hemispheres 17.5
2620 Female, age 94, left hemisphere 17.0
2436 Male, age 74, both hemispheres 15.5
Parahippocampal cortex
nTPM: 18.3
2018 Male, age 76, both hemispheres 23.0
2622 Female, age 67, right hemisphere 20.8
2692 Male, age 74, both hemispheres 20.5
1990 Female, age 91, right hemisphere 18.6
2532 Female, age 72, left hemisphere 18.0
2245 Female, age 91, both hemispheres 17.7
2693 Female, age 94, both hemispheres 17.0
1850 Male, age 80, both hemispheres 16.6
2250 Female, age 67, right hemisphere 15.9
1933 Female, age 85, both hemispheres 14.9
Perirhinal gyrus
nTPM: 16.3
1841 Female, age 85, right hemisphere 17.4
2848 Male, age 76, right hemisphere 17.1
2521 Female, age 94, right hemisphere 16.4
1794 Male, age 80, right hemisphere 15.6
1847 Female, age 91, left hemisphere 15.0
Subiculum
nTPM: 18.5
2042 Male, age 76, both hemispheres 21.0
2619 Male, age 74, both hemispheres 20.9
2438 Female, age 94, left hemisphere 20.2
1901 Male, age 80, both hemispheres 17.3
2729 Female, age 91, right hemisphere 17.2
1977 Female, age 85, both hemispheres 14.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 70.5
Min nTPM: 2.4
Std nTPM: 11.2
Median nTPM: 17.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 70.5
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 62.8
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 54.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 49.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 45.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 45.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 43.9
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 42.3
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 41.0
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 40.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 40.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.4
FF:10153-102I9 76 years, female 12.8
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.6
Samples: 4

Max nTPM: 3.1
Min nTPM: 1.9
Sample A Female 1.9
Sample B Female 2.5
Sample C Male 3.1
Sample D Male 3.0
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 6.3
Min nTPM: 3.9
Sample A Female 6.3
Sample B Female 3.9
Sample C Male 4.2
Sample D Male 4.2
Subiculum
nTPM: 3.9
Samples: 4

Max nTPM: 6.8
Min nTPM: 1.9
Sample A Female 2.5
Sample B Female 1.9
Sample C Male 4.5
Sample D Male 6.8
Ventral hippocampus
nTPM: 3.1
Samples: 4

Max nTPM: 3.9
Min nTPM: 2.5
Sample A Female 2.5
Sample B Female 2.7
Sample C Male 3.9
Sample D Male 3.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.8
Samples: 4

Max nTPM: 2.9
Min nTPM: 1.2
Sample A Male 1.3
Sample B Male 1.2
Sample C Female 1.7
Sample D Female 2.9
Hippocampal formation
nTPM: 0.6
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.3
Sample A Male 0.3
Sample B Male 0.3
Sample C Female 0.5
Sample D Female 1.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
78534516 Antisense, RP_070620_01_B05, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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