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COPS7A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:71.9 nTPM
HPA:71.9 nTPM
GTEx:59.8 nTPM
FANTOM5:41.1 Scaled Tags Per Million
Pig:44.2 nTPM
Mouse:148.3 nTPM
Allen mouse:23.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026915
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.9
Sample id Sample description nTPM
Hippocampus
nTPM: 64.3
1898 Male, age 80, left hemisphere 72.0
2621 Female, age 67, right hemisphere 65.3
2148 Female, age 91, left hemisphere 64.4
1855 Male, age 76, left hemisphere 63.9
2529 Female, age 94, left hemisphere 62.9
1911 Female, age 85, right hemisphere 57.4
Dentate gyrus
nTPM: 65.4
1927 Female, age 91, both hemispheres 69.6
2530 Female, age 94, left hemisphere 69.2
2528 Male, age 74, both hemispheres 67.9
2010 Male, age 76, both hemispheres 65.8
2246 Female, age 85, both hemispheres 61.5
2531 Female, age 67, both hemispheres 58.4
Entorhinal gyrus
nTPM: 67.0
2764 Male, age 80, right hemisphere 74.4
1938 Female, age 85, left hemisphere 67.5
2613 Female, age 94, left hemisphere 67.4
1787 Male, age 76, left hemisphere 65.0
2686 Male, age 75, right hemisphere 65.0
2117 Female, age 91, right hemisphere 62.6
Hippocampus, CA1
nTPM: 67.2
2749 Male, age 80, left hemisphere 82.6
1873 Female, age 85, both hemispheres 68.4
2527 Male, age 74, both hemispheres 63.8
2082 Female, age 91, right hemisphere 62.1
2045 Male, age 76, both hemispheres 59.0
Hippocampus, CA2
nTPM: 67.4
1963 Male, age 80, left hemisphere 76.8
1892 Male, age 76, both hemispheres 70.6
2437 Female, age 94, left hemisphere 67.2
2249 Male, age 74, both hemispheres 65.4
2113 Female, age 91, right hemisphere 62.8
1940 Female, age 85, left hemisphere 61.6
Hippocampus, CA3
nTPM: 64.4
2137 Male, age 80, left hemisphere 71.9
2436 Male, age 74, both hemispheres 68.4
1867 Male, age 76, both hemispheres 64.4
2620 Female, age 94, left hemisphere 61.0
2861 Female, age 67, both hemispheres 60.6
1891 Female, age 85, both hemispheres 60.1
Parahippocampal cortex
nTPM: 66.7
1850 Male, age 80, both hemispheres 73.8
1990 Female, age 91, right hemisphere 70.2
2245 Female, age 91, both hemispheres 68.0
2250 Female, age 67, right hemisphere 68.0
2532 Female, age 72, left hemisphere 67.4
1933 Female, age 85, both hemispheres 66.4
2692 Male, age 74, both hemispheres 65.7
2693 Female, age 94, both hemispheres 64.8
2622 Female, age 67, right hemisphere 61.7
2018 Male, age 76, both hemispheres 60.5
Perirhinal gyrus
nTPM: 71.9
1847 Female, age 91, left hemisphere 78.7
1794 Male, age 80, right hemisphere 77.8
1841 Female, age 85, right hemisphere 71.7
2521 Female, age 94, right hemisphere 67.1
2848 Male, age 76, right hemisphere 64.2
Subiculum
nTPM: 62.0
2619 Male, age 74, both hemispheres 67.8
1977 Female, age 85, both hemispheres 67.0
1901 Male, age 80, both hemispheres 65.9
2729 Female, age 91, right hemisphere 60.7
2042 Male, age 76, both hemispheres 56.8
2438 Female, age 94, left hemisphere 53.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.8
Samples: 197

Max nTPM: 106.1
Min nTPM: 29.9
Std nTPM: 16.3
Median nTPM: 56.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 106.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 102.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 97.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 95.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 92.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 92.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 91.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 91.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 90.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 90.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 89.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.1
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.3
Samples: 4

Max nTPM: 53.2
Min nTPM: 32.7
Sample A Female 53.2
Sample B Female 41.9
Sample C Male 37.3
Sample D Male 32.7
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 47.1
Min nTPM: 38.6
Sample A Female 47.1
Sample B Female 38.6
Sample C Male 40.4
Sample D Male 38.7
Subiculum
nTPM: 43.4
Samples: 4

Max nTPM: 57.5
Min nTPM: 36.9
Sample A Female 57.5
Sample B Female 37.3
Sample C Male 41.8
Sample D Male 36.9
Ventral hippocampus
nTPM: 44.2
Samples: 4

Max nTPM: 56.5
Min nTPM: 30.9
Sample A Female 45.4
Sample B Female 30.9
Sample C Male 56.5
Sample D Male 43.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 148.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 148.3
Samples: 4

Max nTPM: 162.3
Min nTPM: 136.9
Sample A Male 136.9
Sample B Male 156.9
Sample C Female 137.2
Sample D Female 162.3
Hippocampal formation
nTPM: 145.1
Samples: 4

Max nTPM: 159.4
Min nTPM: 132.5
Sample A Male 159.4
Sample B Male 132.5
Sample C Female 145.7
Sample D Female 142.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.9
512762 Antisense, RP_040809_02_C12, Mouse strain C57BL/6J (56 days, male) 23.9

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The Human Protein Atlas

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